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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ywwA_

Fold library idPDB HeaderMoleculeTitle
c5ywwA_2.33PDB header: hydrolaseChain: A: PDB Molecule: nucleotide binding protein pinc;


Added to library: Sat Jun 16 08:25:39 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNDLMLDKSALLFGVSKYLEKGIITGNVLIHKSLLAELERESNDGLVSAEIALDEVKKLKDITERILVNF
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Known secondary structure (DSSP)


TTTTSS
STT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EIVGDDSKKGEANELSREYCLEKGCIIVTADETQKKICDAMGIQYNFLQPLKQGLSFESFFDDETMSLHI
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Known secondary structure (DSSP) S
TT

S


S
T









GGGGG

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KEDTVPKAKKGKPGNWKFVNLSDKPMLSTDVRMIANEIINAVRLIKGSFVEIERRGSLSIQLGNYAVVIT
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Known secondary structure (DSSP) TTS

TTS
SS


TTSTT
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RPPLSDGWEITITRPVVRKRLEDYNLDERLIKRLEERAEGIIIAGAPGMGKTTFAQALAEYYMRLGKIVK
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Known secondary structure (DSSP)
TTTSSS




SS
GGGG


T

BSTTSSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TIESGELHDILLLSRPDYTVYDEMRNDEDFKLYVDLRLAGVGMVGVVHATSPIDAIHRFVNRVDIGTIPN
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Known secondary structure (DSSP)




S



STT


BSSTTTTTTS
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence ILDTIIFINSGNVSKVYTLEMTVKVPAGLKEADLARPVVEIKDLATGNTEYEIYVFGEQTMIVPVNRGIT
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Known secondary structure (DSSP)

TT

TT


GGG
TTT

TT
 .........430.........440.........450.........460.........470.........480.....
Sequence MSNMEFKISKIVNNIIPNATVKYEDGEYVIVIPKEEIGKYNRKLVQRLKRLEKKNNIKIKIKLSD
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Known secondary structure (DSSP) TT
TT
TT
GGGGGG

T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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