Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yu7A_

Fold library idPDB HeaderMoleculeTitle
c5yu7A_3.30PDB header: rna binding proteinChain: A: PDB Molecule: exportin-5;


Added to library: Sat Sep 1 08:37:54 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVNALCEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHV
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)

S
TTS

SST
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSK
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTTTT

TSS

TTTS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQE
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)
TT

S
TTSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTS
TTTTTTT
TTTT



TGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence KPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLE
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) GGGGGGGSS
S
TTBTTBSS



TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TSS

TTGGG
S



TT

SST
 .........430.........440.........450.........460.........470.........480.........490
Sequence DFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLSTFLDAGSLCSVFSPSFVQWEAMT
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
SSTT










SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LFLESVITQMFRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKL
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) S
GGG




S
GGGGGT
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence FSSVTFETVEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCA
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) T


S
SSSS

B
GGGSTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQKSCDPGLEDPCGLN
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) GGG

S
TT
T


SS

STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence RARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLY
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)



SSTT

SSS


TTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence APEMLAKMAEPFTKALDMLDAEKSAILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGPS
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) STTS
STTTTTTS

T







SSS
BS
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence MQQDFYTVEDLATQLLSSAFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) ST
TTTSS
TTTS
TT

STT
 .........920.........930.........940.........950.........960.........970.........980
Sequence SQKWQVINQRESQEMLEEQLVRMLTREVMDLITVCCVSELTDLGKCLMKHEDVCTALLITAFNSLAWKDT
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) T

B

B
TSSGGGSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LSCQRTTSQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEI
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TTTT

TS
S
TTTT
STT
 .........1060.........1070.........1080.........1090.........1100.........1110........
Sequence RAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCIGKPLGEQFRKEVHIKNLPSLF
Predicted secondary structure






























SS confidence



































































Known secondary structure (DSSP) TTSSS

S

TTT


S
TTTT

TTS




SSS

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D