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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yseB_

Fold library idPDB HeaderMoleculeTitle
c5yseB_1.60PDB header: sugar binding proteinChain: B: PDB Molecule: lin1841 protein;


Added to library: Sat May 5 09:18:53 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAG
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Known secondary structure (DSSP)




T


SGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSD
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Known secondary structure (DSSP)
B


TSSS

GGGB
TTTT


TT
SS


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence AALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGTPVFNKKPFVDTVTYLDSFIKNGSAPDTD
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Known secondary structure (DSSP) TT
TT

S



TT
TTTT

SB
TTS
B
TTSTTSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSNKKDD
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Known secondary structure (DSSP)



TSTT
SS


GGGTTS


BSS



BBTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGK
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Known secondary structure (DSSP) T
TT
B
SBGGGGGS
TT
B
S


TT
 .........360.........370.........380.......
Sequence SWEQIYRGGADVQTQMDTFNDQVEALLKKLEHHHHHH
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Known secondary structure (DSSP) TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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