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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yq7C_

Fold library idPDB HeaderMoleculeTitle
c5yq7C_4.10PDB header: photosynthesisChain: C: PDB Molecule: cytochrome subunit of photosynthetic reaction center;


Added to library: Sat May 5 08:33:22 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQNPIYVNYTQEPTDYISAESLAAMNAYIQANP
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Known secondary structure (DSSP)

S

TT

TTSS
S


GGGSSSS
SS

TT
TTGGGGGG

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QPQAVQVLKGMTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNAAKKVTARKMMLMSADLNQNY
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Known secondary structure (DSSP)
SS

SS
SS

TS
SS


S
SSS
SSSS

SSSTTTGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence TAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKDVSNHEVEQNQ
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Known secondary structure (DSSP)
TT
TT
S


B

TTTT

TT
SS

SS
SSS
TTS
SS




SS

TT



SS
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FAMYHMNVSMGQGCTFCHNARYFPSYEIAQKNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLC
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Known secondary structure (DSSP) SSS
S
SSSTTSSTT

TTSSSTTTT
SSSS
SS
STT




S
SS
 .........290...
Sequence HQGANIPPGAAKP
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SS confidence












Known secondary structure (DSSP)
SSSS
SS
BS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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