Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ylzW_

Fold library idPDB HeaderMoleculeTitle
c5ylzW_3.60PDB header: splicingChain: W: PDB Molecule: pre-mrna-splicing factor atp-dependent rna helicase prp22;


Added to library: Sat Jul 21 08:47:35 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALTSPERWEIRQLIASGAASIDDYPEQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRT
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)


TT


GGGS









SSSTSSTTTT

TSSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)


TTTSGGGGG
S

GGGSTT
SSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVAT
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T

TTSS

BTTB



TT

TT
TT
TT

TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence DVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TT
SSTT
TTTTS









SS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPKGSRKVV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
S

SSTTTS





TT

TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTES
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
TS


TT



TTTT

GGGSSSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TS
SS


GGGGS
TT
S
GGG


SS


TSB
TTS
B
 .........500.........510.........520.........530.........540.........550.........560
Sequence GKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTSSS
GGGT
TTS


B


SSSTT

TTB
 .........570.........580.........590.........600.........610.........620.........630
Sequence NVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) SSS
TTB
T





SSTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDA
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

TTS

TTTT
B

TTS



STTSSSS


TTTS
GGGS
 ...
Sequence ESQ
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D