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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yimC_

Fold library idPDB HeaderMoleculeTitle
c5yimC_3.39PDB header: transferaseChain: C: PDB Molecule: sdea;


Added to library: Sat Jun 2 08:27:38 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFSLYTDDTVKAAAQYAYDNYVESAPANFGGRMVYRQHHGLSHTLRTMAYAELIVEEARKAKLRGETLGK
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Known secondary structure (DSSP)


TTT









SSS

S
SSSSTT



B
 .........80.........90.........100.........110.........120.........130.........140
Sequence FKDGRTIADVTPQELKKIMIAQAFFVAGRDDEASDAKNYQKYHEQSRDAFLKYVEDVNFYARVIEDKSHD
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Known secondary structure (DSSP)
SSS
BGGG

TS


TTS


SS

SS







SS
SS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence WESTPAHVLINQGHMVDLVRVKQPPESFLQRYFSSMQRWIGSQATEAVFGIQRQFFHATYEVVAGFDSDN
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Known secondary structure (DSSP)



GGGT
SSS
TT




B
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEPHLVVSGLGRYVIGEDGQPIREAPKKGQKEGDMRVDEFLKLPEIQNTFPGSGKHLQGGMPGMNEMDYW
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Known secondary structure (DSSP)
SB



SSS



SSS


S
S


TT


BTS
STT


B

S
SS

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NRLNSLNRARCENDVDFCLKQLQTAHDKAKIEPIKQAFQSSKGKERRQPNVDEIAAARIIQQILANPDCI
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Known secondary structure (DSSP)

S





S





GGGB
 .........360.........370.........380.........390.........400.........410.........420
Sequence HDDHVLINGQKLEQQFFRDLLAKCEMAVVGSLLNDTDIGNIDTLMRHEKDTEFHSTNPEAVPVKIGEYWI
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Known secondary structure (DSSP)
SS
B
TTT

B
S


TSS


B

S
SSS

B
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence NDQRINNTQKKHDLIFLMQNDAWYFSRVNAIAQNRDKGSTFKEVLITTLMTPLTSKALVDTSQAKPPTRL
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Known secondary structure (DSSP)



S
TT


S

GGGSTTSTT



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence FRGLNLSEEFTKGLIDQANAMIANTTERLFTDHSPEAFKQIKLNDLSKMSGRTNASTTTEIKLVKETWDS
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Known secondary structure (DSSP)


T



TTS

S
TT
TT
SS
S

S



SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence NVIFEMLDPDGLLHSKQVTESEFSVYLPEDVALVPVKVTLDGKTQKGENRYVFTFVAVKSPDFTPRHESG
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Known secondary structure (DSSP) S
TT

S







SS


B
TTS
B

TTTS



S
 .........640.........650.........660.........670.........680.........690.........700
Sequence YAVEPFLRMQAAKLAEVKSSIEKAQETIFNLQNEVEAVQYSHLSTGYKNFLKNTVGPVLENSLSGLMESD
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Known secondary structure (DSSP) SS



GGG

S
SSS
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence TDTLSKALAAFPSDFEEARQAKRQMDAIKQMVGNKVVLDALTQCQDALEKQNIAGALDALKKIPSEKEMG
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Known secondary structure (DSSP) T







TSSSTSGGGG


 .........780.........790.........800.........810.........820.........830.........840
Sequence TIRRELREQIQSARQELESLQRAVVTPVVTDEKKVRERYDALIENTSKKITELETGKLPNLDAVKKGISN
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Known secondary structure (DSSP)





SSGGGTTS


S
 .........850.........860.........870.........880.........890......
Sequence LSNLKQEVTVLRNEKIRMHVGTDKVDFSDVEKLEQQIQVIDTKLADAYLLEVTKQI
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Known secondary structure (DSSP) TTSSSS


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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