PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5yhkB_

Fold library id	PDB Header	Molecule	Title
c5yhkB_	2.42	PDB header: metal binding protein	Chain: B: PDB Molecule: alpha-acetolactate decarboxylase;

Links to external resources
Added to library: Sat Oct 13 08:35:16 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V I Y Q T S L M S A L L S G V Y E G D T T I A D L L A H G D F G L G T F N E L D G E M I A F S S Q V Y Q L R A D G S A R A A K P E Q K T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T S
S
G G G
S T T
T T S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F A V M T W F Q P Q Y R K T F D A P V S R Q Q I H D V I D Q Q I P S D N L F C A L R I D G N F R H A H T R T V P R Q T P P Y R A M T D V L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T S
S S
G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .

Sequence D Q P V F R F N Q R E G V L V G F R T P Q H M Q G I N V A G Y H E H F I T D D R Q G G G H L L D Y Q L E S G V L T F G E I H K L M I D L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T S
S T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	I	Y	Q	T	S	L	M	S	A	L	L	S	G	V	Y	E	G	D	T	T	I	A	D	L	L	A	H	G	D	F	G	L	G	T	F	N	E	L	D	G	E	M	I	A	F	S	S	Q	V	Y	Q	L	R	A	D	G	S	A	R	A	A	K	P	E	Q	K	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S							T	T													T	S		S							G	G	G		S						T	T							T	T	S							T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	A	V	M	T	W	F	Q	P	Q	Y	R	K	T	F	D	A	P	V	S	R	Q	Q	I	H	D	V	I	D	Q	Q	I	P	S	D	N	L	F	C	A	L	R	I	D	G	N	F	R	H	A	H	T	R	T	V	P	R	Q	T	P	P	Y	R	A	M	T	D	V	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S															S			T	T	S																							S	S				G	G	G			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Sequence	D	Q	P	V	F	R	F	N	Q	R	E	G	V	L	V	G	F	R	T	P	Q	H	M	Q	G	I	N	V	A	G	Y	H	E	H	F	I	T	D	D	R	Q	G	G	G	H	L	L	D	Y	Q	L	E	S	G	V	L	T	F	G	E	I	H	K	L	M	I	D	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	T	T	T	S		S									T	T	S	S