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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yh1A_

Fold library idPDB HeaderMoleculeTitle
c5yh1A_2.18PDB header: ribosomal proteinChain: A: PDB Molecule: member of s1p family of ribosomal proteins;


Added to library: Sat Aug 4 08:48:02 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PGSHXAEVKRKIEEELDRRAQPSDVGFLVKSEVLEALKPKIXKAAFXIRRAIFEGRPIILRHHADTDGYT
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Known secondary structure (DSSP)







SS

TT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGVALETAIIPLIEKVAPDPEARWHLFKRRPSRAPFYELEDVLKDIIFXXEDHXRFGDELPLVVIVDNGG
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Known secondary structure (DSSP)
SSTTSSSS






SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TTEDIPAYKRLKAYGVKIVVIDHHDPRDWISEDKAKVDEYVDVHVNPHHVKRGYYELTAGXLATEVARYI
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Known secondary structure (DSSP) SGGGTTT



S



TTGGGGG
S
GGGTSTT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NPEVEDRIKHLPAIAGTGDRSKAPEFYQYLEYAKEKGLDEEDLKKIAEVIDHEAFYWKFXDGRGIIEEIL
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Known secondary structure (DSSP)
GGGTTT


TT

TTS

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LITGNLQRHRXLVEGIYPEVKEKQEKVLKAVLPHVKSVVLPNGIRFNTIDVELYAPKFEYPSPGKLSGII
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Known secondary structure (DSSP) T
SS
GGG

TTS
TTTSS
TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence HDHFKEQYGEDSPILTLAYGPDFAVVRASDGXAKYNFDLNKIVKILAEKLPDAGVEGGGHSYAGSIKFFE
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Known secondary structure (DSSP)
TTS

SS
GGGGGGT


GGGT
SSS

G
 .........430.........
Sequence GKRKEVLEAFAKEVLKLKA
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Known secondary structure (DSSP) GGT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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