Fold library entry viewer: c5yfpB_

Added to library: Sat Feb 3 08:24:39 2018
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	R	F	Q	I	G	D	E	Q	L	L	R	F	Y	Q	L	K	T	I	N	P	T	H	S	W	A	Q	D	S	S	K	K	E	S	R	A	Y	L	N	D	E	S	L	S	Y	I	R	D	P	L	N	G	Q	E	M	S	K	E	L	Q	H	L	P	N	D	S	M	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	-				S	S	T	T	T	T	T	G	G	G	T				T	T	S		S	S					S						S	S	T	T	T																T	T	S	S	T	T	T	T		T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	Y	L	V	N	S	K	Q	F	N	V	K	A	F	L	R	D	M	H	K	Q	D	S	F	N	D	L	N	N	S	L	D	R	L	D	S	D	I	Q	D	Q	S	I	H	L	K	Q	L	V	G	K	N	F	T	K	Y	V	K	I	K	N	K	L	D	Q	I	Y	K	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S		S	S	S			T	T	T	S			S	S	S			S	S	S	T	T	T	T	T																				T	T	T	T	T																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	E	K	T	N	E	K	N	Q	C	D	S	P	K	E	N	Q	I	N	V	E	S	L	N	K	K	V	D	E	V	I	R	T	T	T	F	K	L	K	P	L	M	D	N	Y	Q	K	I	L	N	Y	Q	A	T	K	K	F	I	E	L	N	K	F	Y	F	N	L	P	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S	S	S	S	S	S		S		S	S	S	T	T		T	T					T	T	T	T											T																				T		S	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	K	R	C	L	T	N	N	D	F	N	E	F	I	I	E	Y	S	K	G	L	T	L	R	R	R	F	N	Q	S	S	D	A	S	Q	S	L	V	I	K	R	I	W	T	Q	I	E	N	L	L	V	T	Y	K	D	L	I	W	N	S	L	I	N	S	N	F	N	I	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S		S	T	T	T	T	T									T	T							T	T																													T			S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	Q	E	T	I	L	S	L	F	S	K	L	L	N	L	E	N	F	I	K	N	T	T	S	S	S	N	E	N	P	I	L	R	W	M	S	I	K	M	N	G	F	Q	N	E	L	N	E	L	S	G	H	M	I	S	K	I	I	H	S	Q	R	L	I	L	Q	N	N	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		S	S	T	T	T	T	T																															T	T	T	T	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	D	K	S	Q	G	C	V	E	L	S	Y	Y	L	K	I	N	Q	L	F	Q	I	I	S	D	T	G	K	D	S	E	G	L	K	S	T	V	E	P	N	K	V	N	T	I	S	G	T	S	Y	L	N	L	N	C	Q	P	S	S	Q	G	L	T	D	S	P	T	I	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S										T	T	T	S	S	G	G	G	T	G	G	G	S	S	S		S	S				S	S		S		S	S	S	S						S	S										S	S	T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	W	L	L	I	L	K	Y	I	N	D	L	W	K	I	C	D	Q	F	I	E	F	W	E	H	I	E	K	F	L	D	G	T	Y	Q	N	S	I	I	N	E	K	R	K	E	N	I	L	I	G	D	S	N	I	I	E	S	Y	Q	K	S	L	I	L	K	E	E	Q	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															S	S		S	S							T	T	T	T	S	S	S											S				T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	V	R	L	K	G	E	E	F	I	T	S	V	S	Q	N	L	I	S	F	F	T	S	S	Q	S	S	L	P	S	S	L	K	D	S	T	G	D	I	T	R	S	N	K	D	S	G	S	P	L	D	Y	G	F	I	P	P	N	C	N	G	L	S	C	L	R	Y	L	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S	S	S	S	T	T	S	S						S											S	S	S	S	S		T	T				S	S	S		S	S	S	S	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	V	E	P	I	L	K	F	S	T	E	L	A	Q	L	N	I	T	T	N	G	I	T	I	C	R	N	T	L	S	T	I	I	N	R	C	V	G	A	I	S	S	T	K	L	R	D	I	S	N	F	Y	Q	L	E	N	W	Q	V	Y	E	T	V	T	F	S	S	K	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S			S	S	S	S																												T	T	S	S	T	T	T			S		S		S								T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	S	S	K	N	L	T	F	E	Y	G	V	T	Q	F	P	E	I	V	T	S	F	Q	E	V	S	I	K	T	T	R	D	L	L	F	A	Y	E	K	L	P	I	I	N	G	I	S	V	V	S	Y	P	S	K	Q	L	L	T	G	I	E	I	Q	Q	I	I	S	M	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											T	T							T	T												G	G	G	S	T	T			T	T					S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	L	E	A	I	L	K	N	A	A	K	D	K	D	N	P	R	N	S	H	T	I	L	T	L	T	N	L	Q	Y	F	R	E	C	A	F	P	N	I	L	Q	Y	F	D	D	A	F	E	W	N	L	A	S	K	N	L	E	L	F	S	L	L	S	K	M	E	S	S	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		S		S	S	S	S	T	T	T											T	T	T							G	G	G	S	S			S		S			T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	N	Y	L	S	D	L	K	I	N	L	R	D	T	L	E	E	K	F	H	E	I	N	W	P	M	Y	T	S	N	S	F	R	V	G	D	Y	I	I	E	A	L	M	I	L	I	V	V	H	S	E	C	F	R	I	G	P	Q	L	I	H	K	I	L	I	E	T	Q	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T					S	S	S	T	T	S	S							S																				T	T	T	T	S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	A	R	Y	L	F	E	A	F	K	P	Y	V	G	N	L	S	N	D	G	S	L	Q	I	I	V	D	L	E	F	F	Q	K	V	M	G	P	L	L	E	K	D	T	E	A	T	L	R	A	C	L	Q	N	C	F	Q	N	D	T	N	R	L	Q	K	C	I	N	E	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	S	S	T	T		S	T	T	T	T	T	T	T	T												T		S	S			S											T	S	S	S	S	S	S	S										S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
Sequence	P	I	V	S	A	N	L	K	R	T	A	I	Q	F	A	A	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T		T	T	G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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