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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ybwA_

Fold library idPDB HeaderMoleculeTitle
c5ybwA_1.90PDB header: isomeraseChain: A: PDB Molecule: aspartate racemase;


Added to library: Sat Dec 23 08:34:02 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPQFEVTVTDIKKAYDRISKHILYTPVFTSPTFDRMVGSKAGRQFYFKAENLQKTGSFARGALNAILCAL
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Known secondary structure (DSSP)



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TTTT
GGGSGGGB

 .........80.........90.........100.........110.........120.........130.........140
Sequence EREPSLAGVVTHSSGNHGQALAWASKRAGVKCCVVVPKTAPQVKFDAMENYGAEVVKCEPNPTSRKETCE
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TT


SST
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TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLAKSRGYKYISSSDDYDVIAGQGTIALELLQQQPDLDAILVSVSAGGMASGICVYTKNTKSDLKVFLVE
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Known secondary structure (DSSP) T


SSS

TT


SSSTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEGKMLEECISKRERLWPNPPQFLDTIADGIILQQCGNKTWPIILELPEKEVITVNNDNIVEAMRFVFAR
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Known secondary structure (DSSP) TT

TS



SS

B
S
S
GGG
BSS

TTTTTSS
S


 .........290.........300.........310.........320........
Sequence MKLVIEAAAGATVAAAMTERFQNFHPEAKKVGIILCGGNVDIEKLPWT
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Known secondary structure (DSSP)




SS
TT


B



TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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