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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ya2A_

Fold library idPDB HeaderMoleculeTitle
c5ya2A_2.70PDB header: structural proteinChain: A: PDB Molecule: autoinducer-2 kinase;


Added to library: Sat Jul 14 08:28:40 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVS
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Known secondary structure (DSSP)



SS
TTS








T

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHR
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Known secondary structure (DSSP)
TT

GGG




GGGTTS

TTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLL
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Known secondary structure (DSSP) TT

S


B
GGGT
TTTT
T

S
B

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNP
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S
TT
TT

STT
SSSSS



TTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDHAAP
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Known secondary structure (DSSP)
SSTT

STTGGGTS
SS
TTGGG







 .........360.........370.........380.........390.........400.........410.........420
Sequence SFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLP
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Known secondary structure (DSSP) S

S
TTTSS



S
SGGGG
TS
 .........430.........440.........450.........460.........470........
Sequence VNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDK
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Known secondary structure (DSSP) S

STTSSS





T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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