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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y88U_

Fold library idPDB HeaderMoleculeTitle
c5y88U_3.70PDB header: splicingChain: U: PDB Molecule: pre-mrna-splicing factor spp382;


Added to library: Sat Aug 4 08:39:03 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSGITTPIETQSRPMHNAGLGMFSNTNSSNYHSENEDYLSSEDEVVVKFNKTSTEVLGEALLNDSGVRTL
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 .........80.........90.........100.........110.........120.........130.........140
Sequence RELRLAGVQLPESILKAVPKPKKDVVVEILQELLGSLEAIRQRTSPLEVQVKEYYGQLSELEVTLRDESK
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 .........150.........160.........170.........180.........190.........200.........210
Sequence HVSLYDKIGSDDELIDRLTSCLLRKELLIEFLEKPNDILDELTQIIELLAYRMSKFLNRTQTTIFKVIYP
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 .........220.........230.........240.........250.........260.........270.........280
Sequence KLKKFTKSKIDSAITLLLDFQLSFIGCKEHIMEEKLLQELDNWELHDEVDHVSPRILIDDKIKDTIVDKI
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 .........290.........300.........310.........320.........330.........340.........350
Sequence EAKNWYHRESFCITNSDIIFIKRRYYKILCKEFLPKFLRHNDPIYELEEWKEKDSGFFYFMKKLRSKQYE
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 .........360.........370.........380.........390.........400.........410.........420
Sequence LMMRGTFNLYQWHLYSTVEDLNWLMNTVFEHSLIELSEIRKSYNIYHLDKSTLDELGKVSSSFKDVVEDY
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S



 .........430.........440.........450.........460.........470.........480........
Sequence CLEKGYLISKIPNRYTQLPYGRDQDCIVPLFEIRNGKKKMEVALKHDILWVEDSSGTFKPIYLWALDL
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Known secondary structure (DSSP) T


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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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