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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y6tA_

Fold library idPDB HeaderMoleculeTitle
c5y6tA_1.70PDB header: carbohydrateChain: A: PDB Molecule: endo-1,4-beta-mannanase;


Added to library: Sat Jun 30 08:24:18 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QQFLDVQNGQLRLNGEKVFMSGMNIAWQNYGRDFGNGQYDCCTGNALEDYIVRIKAEGGNSLRIWVHCDG
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Known secondary structure (DSSP)



TTTTB



SSTT
SSSTTTTTT

TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYTPEFDGNGYVVGTDAQNTMTSDLAQFLDVAYANNVLVFIVLWNGATTPTSRYRDLIYDDSKLQTYIDQ
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Known secondary structure (DSSP) SSSS
TTS
SSTTS
TT
SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence ALVPMVSALSGKVALGGWEVMNEPEGIVSAGVSDGNPCFDTQPLAGSGAGWADSIPMQRLQSFINKQTAA
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Known secondary structure (DSSP) TTTT
TT
GGGGB

S


SSGGG

GGGTTS


SS

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence IKRADPKVIVTLGSWSERAQTDQFGWRNYYTDNCLIDAGGDSLGVIDFYQMHTYAWEGAYTSSSPLLVPN
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Known secondary structure (DSSP)
TT
SSGGGB
SSTT

BTTS

TT


S


BTTB

TT
TTTS
G
 .........290.........300.........310.........320.........330.........340.........350
Sequence SQYNLDKPNNIGEFSQSGGDGRSITDQFDWAYTQGYCGAWSWQANGGGDNADSFATQAQGLNHLRGRNDQ
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Known secondary structure (DSSP) GGG

SS


STTTTS

TT
SS
TT

STT


TT
T
 .........360.
Sequence NAGGRIDIILQ
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Known secondary structure (DSSP) TTT
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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