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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y6rA_

Fold library idPDB HeaderMoleculeTitle
c5y6rA_3.01PDB header: transferaseChain: A: PDB Molecule: genome polyprotein;


Added to library: Sat May 5 08:31:03 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNLTPLFEELLQQCPPGGQNKTAHMVSAYQLAQGNWMPTSCHVFMGTISARRTKTHPYEAYVKLRELVEE
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Known secondary structure (DSSP)
TTTTS
B



TTS
SS



BBTTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence HKMKTLCPGSSLGKHNEWIIGKIKYQGNLRTKHMLNPGKVAEQLCREGHRHNVYNKTIGSVMTATGIRLE
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Known secondary structure (DSSP) S






GGGTT

B





SSS



BS












TTT

GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLPVVRAQTDTTNFHQAIRDKIDKEENLQTPGLHKKLMEVFNALKRPELESSYDAVEWEELERGINRKGA
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Known secondary structure (DSSP) GS


ST







TTTT

GGGTT
B



TT

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence AGFFERKNIGEILDSEKNKVEEIIDNLKKGRNIKYYETAIPKNEKRDVNDDWTAGDFVEEKKPRVIQYPE
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Known secondary structure (DSSP)

TT



S
T









T







 .........290.........300.........310.........320.........330.........340.........350
Sequence AKTRLAITKVMYKWVKQKPVVIPGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTKDLELI
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Known secondary structure (DSSP) TTSS

STTB
TTS
TTSSS
BTTGGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence KDIQKYYFKKKWHKFIDTLTMHMSEVPVISADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMIYAFCEATG
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Known secondary structure (DSSP) B
GGGTTSBS


TT
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence VPYKSFDRVAKIHVCGDDGFLITERALGEKFASKGVQILYEAGKPQKITEGDKMKVAYQFDDIEFCSHTP
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Known secondary structure (DSSP)

GGGGGGTTTT

B


TTSS

SSGGG

BTTB
 .........500.........510.........520.........530.........540.........550.........560
Sequence IQVRWSDNTSSYMPGRNTTTILAKMATRLDSSGERGTIAYEKAVAFSFLLMYSWNPLIRRICLLVLSTEL
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Known secondary structure (DSSP) TTS


S
S
SSTTSTTSTSST
 .........570.........580.........590.........600.........610.........620.........630
Sequence QVKPGKSTTYYYEGDPISAYKEVIGHNLFDLKRTSFEKLAKLNLSMSVLGAWTRHTSKRLLQDCVNVGVK
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Known secondary structure (DSSP) T



SSSS
SS
GGG
TT
S
TTS
 .........640.........650.........660.......
Sequence EGNWLVNADRLVSSKTGNRYIPGEGHTLQGRHYEELV
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Known secondary structure (DSSP) SS

GGGGSS






SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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