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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y4oA_

Fold library idPDB HeaderMoleculeTitle
c5y4oA_3.80PDB header: membrane proteinChain: A: PDB Molecule: low conductance mechanosensitive channel ynai;


Added to library: Sat Mar 23 08:29:25 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIG
Predicted secondary structure







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Known secondary structure (DSSP)



S
GGG

SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVG
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Known secondary structure (DSSP) SB


SSS


SB
SS
B
TTS
B



GGGGGTS



GGG
S




B
GGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGA
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Known secondary structure (DSSP)
SSB
SSS





TTS


S

STT
 .........220...
Sequence DFAFPSQTLYMDN
Predicted secondary structure





SS confidence












Known secondary structure (DSSP)
B











Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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