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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y2gA_

Fold library idPDB HeaderMoleculeTitle
c5y2gA_3.00PDB header: toxinChain: A: PDB Molecule: maltose-binding periplasmic protein,protein b;


Added to library: Sat Mar 2 08:32:06 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQ
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Known secondary structure (DSSP)

S




TTSSTS




B

TTTTT


STTSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAK
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Known secondary structure (DSSP) T

B





TTB
BSSS
B
S

TTT
SS

SBGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSI
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Known secondary structure (DSSP) T

S



SSSBT
TTSSSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence AEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLEN
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Known secondary structure (DSSP) TSSS
GGGTT




BGGGS





BTT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAAS
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Known secondary structure (DSSP) TTSSTTS

SSBTTTTS
TTTS


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence GRQTVDAALAAAQTNAVDSNNQAQQMAQKLDQDSIQLRNIKDNVQGTDYEKPVNEAITSVEKLKTSLRAN
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Known secondary structure (DSSP) SSS
T


S
SSTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SETVYDLNSIGSRVEALTDVIEAITFSTQHLANKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDV
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Known secondary structure (DSSP)


SS
STTTB

SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence KALEQKVLTYPDLKPTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQLNPNV
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Known secondary structure (DSSP) TTS
B

TTSB

TTTTS

SS
 .........570.........580.
Sequence TVQQVDQEIVTLQAALQTALK
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Known secondary structure (DSSP) BTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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