PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5y06A_

Fold library id	PDB Header	Molecule	Title
c5y06A_	2.61	PDB header: unknown function	Chain: A: PDB Molecule: msmeg_4306;

Links to external resources
Added to library: Sat May 5 08:34:05 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K A E V S Q Q R S L L T L S E V D A E L A R I A H R G K N L A E Q K R L D E L T A Q R G E V N D R L A A L G I A L E D L D A Q V A K Y E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E I D S V R Q R E D R D R A L V G A K Q V T E I Q H E L E T L Q R R Q A S L E E Q L L E V M E R R E E L M A E R S E E L R R V D E L Q T E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T E A Q Q A R D A A L V E L D Q A R H Q C A T R R D A L V N A I D D Q L V E L Y E K Q R A R G G A G A G P L Q G R R C G A C R I E I D R G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S
S T T T T T
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . .

Sequence I A R I T A A A D D D V V R C P E C G A I L L R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T B
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	A	E	V	S	Q	Q	R	S	L	L	T	L	S	E	V	D	A	E	L	A	R	I	A	H	R	G	K	N	L	A	E	Q	K	R	L	D	E	L	T	A	Q	R	G	E	V	N	D	R	L	A	A	L	G	I	A	L	E	D	L	D	A	Q	V	A	K	Y	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	I	D	S	V	R	Q	R	E	D	R	D	R	A	L	V	G	A	K	Q	V	T	E	I	Q	H	E	L	E	T	L	Q	R	R	Q	A	S	L	E	E	Q	L	L	E	V	M	E	R	R	E	E	L	M	A	E	R	S	E	E	L	R	R	V	D	E	L	Q	T	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T					S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	E	A	Q	Q	A	R	D	A	A	L	V	E	L	D	Q	A	R	H	Q	C	A	T	R	R	D	A	L	V	N	A	I	D	D	Q	L	V	E	L	Y	E	K	Q	R	A	R	G	G	A	G	A	G	P	L	Q	G	R	R	C	G	A	C	R	I	E	I	D	R	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																S													T	T	T	S		S						T	T			T	T	T			B			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Sequence	I	A	R	I	T	A	A	A	D	D	D	V	V	R	C	P	E	C	G	A	I	L	L	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T	B					T	T	T