PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5xyrA_

Fold library id	PDB Header	Molecule	Title
c5xyrA_	2.80	PDB header: lyase	Chain: A: PDB Molecule: chemokine protease c;

Links to external resources
Added to library: Sat Aug 11 08:49:39 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L P P V N T D I H D W V K T K G A W D K G Y K G Q G K V V A V I D T G I D P A H Q S X R I S D V S T A K V K S K E D X L A R Q K A A G I N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T
T T T
S S T T
S
T T S T T
S
G G G S S S
S T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G S W I N D K V V F A H N Y V E N S D N I K E N Q D T K Y E S H G X H V T G I V A G N S K E A A A T G E R F L G I A P E A Q V X F X R V F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S T T T T B
T T
S
S
T T S
B
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N D V X G S A E S L F I K A I E D A V A L G A D V I N L S L G T A N G A Q L S G S K P L X E A I E K A K K A G V S V V V A A G N E R V Y G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
S T
S
B S S
S S S
T T T
S
S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D H D D P L A T N P D Y G L V G S P S T G R T P T S V A A I N S K W V I Q R L X T V E E L E K R A D L N H G K A I Y S E S V D F K N I K D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B T T
B T T T S S S S
S
G G G S S
G G G T T S
S S
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence H Q F A Y V K E S T D A G Y N A Q D V K G K I A L I E R D P N K T Y D E X I A L A K K H G A L G V L I F N N K P G Q S N R I P S A F I S H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S S S
S S S
T T S T T T T T T T
S
S S S S
S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence F G K A X S Q L N G N T G S L E F D S V V S K A P S Q K G N E X N H F S N W G L T S D G Y L K P D I T A P G G D I Y S T Y N D N H Y G S Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
S
S S T T S B
T T
S B
T T S
B
T T T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence G T S X A S P Q I A G A S L L V K Q Y L E K T Q P N L P K E K I A D I V K N L L X S N A Q I H V N P E T K T T T S P R Q Q G A G L L N I D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T T T T
B
T T T T
S S
B

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A V T S G L Y V T G K D N Y G S I S L G N I T D T X T F D V T V H N L S N K D K T L R Y D T E L L T D H V D P Q K G R F T L T S R S L K T Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S
S
S S S
B
S S S
B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence Q G G E V T V P A N G K V T V R V T X D V S Q F T K E L T K Q X P N G Y Y L E G F V R F R D S Q D D Q L N R V N I P F V G F K G Q F E N L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
G G G S T T
S S S S S S S
S
G G G S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence V A E E S I Y R L K S Q G K T G F Y F D E S G P K D D I Y V G K H F T G L V T L G S E T N V S T K T I S D N G L H T L G T F K N A D G K F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S B
B T T
S S
S S T T B
T T S
B
S S S
S
T T
T T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence L E K N A Q G N P V L A I S P N G D N N Q D F A A F K G V F L R K Y Q G L K A S V Y H A S D K E H K N P L W V S P E S F K G D K N F N S D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S S S S
B
B S S
T T
T T
S
S
S S
S S T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence R F A K S T T L L G T A F S G K S L T G A E L P D G Y Y H Y V V S Y Y P D V V G A K R Q E X T F D X I L D R Q K P V L S Q A T F D P E T N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
G G G
B
S B
T T S
B
S S S T T
T T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence F K P E P L K D R G L A G V R K D S V F Y L E R K D N K P Y T V T I N D S Y K Y V S V E D N K T F V E R Q A D G S F I L P L D K A K L G D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
B T T B S T T T T
T T S
B
T T T S
S T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence Y Y X V E D F A G N V A I A K L G D H L P Q T L G K T P I K L K L T D G N Y Q T K E T L K D N L E X T Q S D T G L V T N Q A Q L A V V H R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T
S S
S S S
S
B
T T S
S
S S
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Q P Q S Q L T K X N Q D F F I S P N E D G N K D F V A F K G L E N N V Y N D L T V N V Y A K D D H Q K Q T P I W S S Q A G A G A S A I E S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S S S
B
T T S
S S
T T
S
S
S S B
S S
G G G G

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence A W Y G I T A R G S K V X P G D Y Q Y V V T Y R D E H G K E H Q K Q Y T I S V N D K K P X I T Q G R F D T I N G V D H F T P D K T K A L G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S B
T T S
B
S
S S S
T T
S S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence S G I V R E E V F Y L A K K N G R K F D V T E G K D G I T V S D N K V Y I P K N P D G S Y T I S K R D G V T L S D Y Y Y L V E D R A G N V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B T T B S
S S
T T S
B T T B
G G G T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F A T L R D L K A V G K D K A V V N F G L D L P V P E D K Q I V N F T Y L V R D A D G K P I E N L E Y Y N N S G N S L I L P Y G K Y T V E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
S S
T T S
T T S
B
S
T T S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence L T Y D T N A A K L E S D K I V S F T L S A D N N F Q Q V T F K X T X L A T S Q I T A H F D H L L P E G S R V S L K T A Q G Q L I P L E Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S
S S S
S S
T T
T T S
B

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380

Sequence L Y V P K A Y G K T V Q E G T Y E V V V S L P K G Y R I E G N T K V N T L P N E V H E L S L R L V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S S
S S S
B
S
T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	P	P	V	N	T	D	I	H	D	W	V	K	T	K	G	A	W	D	K	G	Y	K	G	Q	G	K	V	V	A	V	I	D	T	G	I	D	P	A	H	Q	S	X	R	I	S	D	V	S	T	A	K	V	K	S	K	E	D	X	L	A	R	Q	K	A	A	G	I	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			T	T					T						T	T	T		S	S	T	T								S				T	T	S	T	T				S		G	G	G	S	S	S		S									T	T	T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	W	I	N	D	K	V	V	F	A	H	N	Y	V	E	N	S	D	N	I	K	E	N	Q	D	T	K	Y	E	S	H	G	X	H	V	T	G	I	V	A	G	N	S	K	E	A	A	A	T	G	E	R	F	L	G	I	A	P	E	A	Q	V	X	F	X	R	V	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S	S	S							T	T	T	T	B										T	T												S					S			T	T	S		B				S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	V	X	G	S	A	E	S	L	F	I	K	A	I	E	D	A	V	A	L	G	A	D	V	I	N	L	S	L	G	T	A	N	G	A	Q	L	S	G	S	K	P	L	X	E	A	I	E	K	A	K	K	A	G	V	S	V	V	V	A	A	G	N	E	R	V	Y	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S		S															T		S								B	S	S			S	S	S														T	T	T									S			S	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	H	D	D	P	L	A	T	N	P	D	Y	G	L	V	G	S	P	S	T	G	R	T	P	T	S	V	A	A	I	N	S	K	W	V	I	Q	R	L	X	T	V	E	E	L	E	K	R	A	D	L	N	H	G	K	A	I	Y	S	E	S	V	D	F	K	N	I	K	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				B	T	T									B	T	T	T	S	S	S	S									S										G	G	G	S	S		G	G	G	T	T	S								S	S			T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	Q	F	A	Y	V	K	E	S	T	D	A	G	Y	N	A	Q	D	V	K	G	K	I	A	L	I	E	R	D	P	N	K	T	Y	D	E	X	I	A	L	A	K	K	H	G	A	L	G	V	L	I	F	N	N	K	P	G	Q	S	N	R	I	P	S	A	F	I	S	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	S	S	S	S				S	S	S							T	T	S	T	T	T	T	T	T	T								S							S	S	S	S									S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	G	K	A	X	S	Q	L	N	G	N	T	G	S	L	E	F	D	S	V	V	S	K	A	P	S	Q	K	G	N	E	X	N	H	F	S	N	W	G	L	T	S	D	G	Y	L	K	P	D	I	T	A	P	G	G	D	I	Y	S	T	Y	N	D	N	H	Y	G	S	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T												S							S	S	T	T	S	B		T	T				S	B		T	T	S		B										T						T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	S	X	A	S	P	Q	I	A	G	A	S	L	L	V	K	Q	Y	L	E	K	T	Q	P	N	L	P	K	E	K	I	A	D	I	V	K	N	L	L	X	S	N	A	Q	I	H	V	N	P	E	T	K	T	T	T	S	P	R	Q	Q	G	A	G	L	L	N	I	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																								S	S	S		T	T	T												T		B					T	T	T	T									S	S		B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	V	T	S	G	L	Y	V	T	G	K	D	N	Y	G	S	I	S	L	G	N	I	T	D	T	X	T	F	D	V	T	V	H	N	L	S	N	K	D	K	T	L	R	Y	D	T	E	L	L	T	D	H	V	D	P	Q	K	G	R	F	T	L	T	S	R	S	L	K	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S	S	S								S												S	S	S		B															S	S	S		B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	G	G	E	V	T	V	P	A	N	G	K	V	T	V	R	V	T	X	D	V	S	Q	F	T	K	E	L	T	K	Q	X	P	N	G	Y	Y	L	E	G	F	V	R	F	R	D	S	Q	D	D	Q	L	N	R	V	N	I	P	F	V	G	F	K	G	Q	F	E	N	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B		S	S												G	G	G								S	T	T													S	S	S	S	S	S	S											S		G	G	G	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	A	E	E	S	I	Y	R	L	K	S	Q	G	K	T	G	F	Y	F	D	E	S	G	P	K	D	D	I	Y	V	G	K	H	F	T	G	L	V	T	L	G	S	E	T	N	V	S	T	K	T	I	S	D	N	G	L	H	T	L	G	T	F	K	N	A	D	G	K	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B			B							T	T				S	S					S	S	T	T	B			T	T	S			B											S	S	S				S							T	T					T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	E	K	N	A	Q	G	N	P	V	L	A	I	S	P	N	G	D	N	N	Q	D	F	A	A	F	K	G	V	F	L	R	K	Y	Q	G	L	K	A	S	V	Y	H	A	S	D	K	E	H	K	N	P	L	W	V	S	P	E	S	F	K	G	D	K	N	F	N	S	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S									S	S	S	S	S	S			B						B	S	S												T	T		T	T			S		S				S	S										S	S	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	F	A	K	S	T	T	L	L	G	T	A	F	S	G	K	S	L	T	G	A	E	L	P	D	G	Y	Y	H	Y	V	V	S	Y	Y	P	D	V	V	G	A	K	R	Q	E	X	T	F	D	X	I	L	D	R	Q	K	P	V	L	S	Q	A	T	F	D	P	E	T	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		S					G	G	G		B		S	B		T	T	S		B			S												S	S	T	T																										T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	F	K	P	E	P	L	K	D	R	G	L	A	G	V	R	K	D	S	V	F	Y	L	E	R	K	D	N	K	P	Y	T	V	T	I	N	D	S	Y	K	Y	V	S	V	E	D	N	K	T	F	V	E	R	Q	A	D	G	S	F	I	L	P	L	D	K	A	K	L	G	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S	S													B	T	T	B	S							T	T	T	T															T	T	S		B				T	T	T	S		S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	Y	Y	X	V	E	D	F	A	G	N	V	A	I	A	K	L	G	D	H	L	P	Q	T	L	G	K	T	P	I	K	L	K	L	T	D	G	N	Y	Q	T	K	E	T	L	K	D	N	L	E	X	T	Q	S	D	T	G	L	V	T	N	Q	A	Q	L	A	V	V	H	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S							T	T	T	T			S	S		S	S	S												S						B							T	T	S		S										S	S			S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Q	P	Q	S	Q	L	T	K	X	N	Q	D	F	F	I	S	P	N	E	D	G	N	K	D	F	V	A	F	K	G	L	E	N	N	V	Y	N	D	L	T	V	N	V	Y	A	K	D	D	H	Q	K	Q	T	P	I	W	S	S	Q	A	G	A	G	A	S	A	I	E	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S							S	S	S	S	S	S			B						T	T	S												S	S		T	T			S		S					S	S	B		S	S		G	G	G	G
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	A	W	Y	G	I	T	A	R	G	S	K	V	X	P	G	D	Y	Q	Y	V	V	T	Y	R	D	E	H	G	K	E	H	Q	K	Q	Y	T	I	S	V	N	D	K	K	P	X	I	T	Q	G	R	F	D	T	I	N	G	V	D	H	F	T	P	D	K	T	K	A	L	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		S	B		T	T	S		B			S												S	S	S																											T	T												S	S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	S	G	I	V	R	E	E	V	F	Y	L	A	K	K	N	G	R	K	F	D	V	T	E	G	K	D	G	I	T	V	S	D	N	K	V	Y	I	P	K	N	P	D	G	S	Y	T	I	S	K	R	D	G	V	T	L	S	D	Y	Y	Y	L	V	E	D	R	A	G	N	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													B	T	T	B	S							S	S															T	T	S							B	T	T	B		G	G	G								T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	A	T	L	R	D	L	K	A	V	G	K	D	K	A	V	V	N	F	G	L	D	L	P	V	P	E	D	K	Q	I	V	N	F	T	Y	L	V	R	D	A	D	G	K	P	I	E	N	L	E	Y	Y	N	N	S	G	N	S	L	I	L	P	Y	G	K	Y	T	V	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S		T	T											S	S		T	T	S												T	T	S		B			S					T	T									S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	L	T	Y	D	T	N	A	A	K	L	E	S	D	K	I	V	S	F	T	L	S	A	D	N	N	F	Q	Q	V	T	F	K	X	T	X	L	A	T	S	Q	I	T	A	H	F	D	H	L	L	P	E	G	S	R	V	S	L	K	T	A	Q	G	Q	L	I	P	L	E	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T					S		S								S	S	S																						S	S				T	T								T	T	S							B
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380
Sequence	L	Y	V	P	K	A	Y	G	K	T	V	Q	E	G	T	Y	E	V	V	V	S	L	P	K	G	Y	R	I	E	G	N	T	K	V	N	T	L	P	N	E	V	H	E	L	S	L	R	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		T	T								S	S									S	S	S		B			S								T	T										B