PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5xu0B_

Fold library id	PDB Header	Molecule	Title
c5xu0B_	2.95	PDB header: transport protein	Chain: B: PDB Molecule: membrane-fusion protein;

Links to external resources
Added to library: Sat Jan 27 08:40:29 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V L L S G T V T A K N E Q Y V Y F D A S K G D L D E I L V S V G D K V S E G Q A L V K Y S S S E A Q A A Y D S A S R A V A R A D R H I N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L N Q A R N E A A S A N S V A S I D A Q L G D A R D A R A D A A A Q L S K A Q S Q L D A X T V L S T L E G T V V E V N S N V S K S P T G A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S S S
S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q V X V H I V S N E N L Q V K G E L S E Y N L A N L S V G Q E V S F T S K V Y P D K K W T G K L S Y I S D Y P K N N N T G S K Y P Y T I D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence T G E V G D L K Q G F S V N X E V K S K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	L	L	S	G	T	V	T	A	K	N	E	Q	Y	V	Y	F	D	A	S	K	G	D	L	D	E	I	L	V	S	V	G	D	K	V	S	E	G	Q	A	L	V	K	Y	S	S	S	E	A	Q	A	A	Y	D	S	A	S	R	A	V	A	R	A	D	R	H	I	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S									G	G	G										S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	Q	A	R	N	E	A	A	S	A	N	S	V	A	S	I	D	A	Q	L	G	D	A	R	D	A	R	A	D	A	A	A	Q	L	S	K	A	Q	S	Q	L	D	A	X	T	V	L	S	T	L	E	G	T	V	V	E	V	N	S	N	V	S	K	S	P	T	G	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T																																			T	T					S	S	S												S	S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	V	X	V	H	I	V	S	N	E	N	L	Q	V	K	G	E	L	S	E	Y	N	L	A	N	L	S	V	G	Q	E	V	S	F	T	S	K	V	Y	P	D	K	K	W	T	G	K	L	S	Y	I	S	D	Y	P	K	N	N	N	T	G	S	K	Y	P	Y	T	I	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S																	T	T								T	T															S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	T	G	E	V	G	D	L	K	Q	G	F	S	V	N	X	E	V	K	S	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				S			T	T