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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xs5A_

Fold library idPDB HeaderMoleculeTitle
c5xs5A_3.30PDB header: virusChain: A: PDB Molecule: genome polyprotein;


Added to library: Sat Sep 30 08:25:09 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNEASVEHFYSRAGLVGVVEVKDSGTSLDGYTVWPIDVMGFVQQRRKLELSTYMRFDAEFTFVSNLSNST
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Known secondary structure (DSSP)

SSSS
S



SSS





TTSSTTBS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPGMLLQYMYVPPGAPKPDGRKSYQWQTATNPSVFAKLSDPPPQVSVPFMSPATAYQWFYDGYPTLQYGQ
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B
TTS


SSTT
GGGS
TTS
TTS






SSSSS


S




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CPNNMMGHFAIRTVSESTTGKNVHVRVYMRIKHVRAWVPRPLRSQAYMVKNYPTYSQTITNTATDRASIT
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Known secondary structure (DSSP)
GGG




SS








SB




S


SSSS



SS


SS


S
S
 .
Sequence T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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