Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xnxB_

Fold library idPDB HeaderMoleculeTitle
c5xnxB_3.70PDB header: hydrolase, transferaseChain: B: PDB Molecule: bifunctional (p)ppgpp synthase/hydrolase rela;


Added to library: Sat Jul 22 08:26:47 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LEPLVAVHREIYPKADLSILQRAYEVADQRYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEA
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)
TT


S
T


T

TTTSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LTEEFGEEVGHLVDVTKLDRVVRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASV
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP)



S





TTT
SS

S
STTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KWELEDLSFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVEGRPKHYWSIYQKMI
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) STT








 .........220.........230.........240.........250.........260.........270.........280
Sequence VKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TT
S


S



SSS
B
TTT


TTTS
BTTTB


TTS
 .........290.........300.........310......
Sequence EVQIRTRDMHRTAEYGIAAHWRYKAAEIDDMAWMRQ
Predicted secondary structure







SS confidence



































Known secondary structure (DSSP)



SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D