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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xnsA_

Fold library idPDB HeaderMoleculeTitle
c5xnsA_2.01PDB header: dna binding protein/cell cycleChain: A: PDB Molecule: chromosome partition protein smc;


Added to library: Sat Aug 5 08:46:57 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPYIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRISDLIFAG
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Known secondary structure (DSSP)

SBTT

SS


SS

TTSSTT


TGGGT
SSGGGGB


 .........80.........90.........100.........110.........120.........130.........140
Sequence SKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDGRSSYWLNGRRATRSEILDILTAAMISPDGY
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Known secondary structure (DSSP) BTTB


SS
TT
SSSSSSS
TTS
TT
TT

SS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NIVLQGDITKFIKMSPLERRLLIDDISGIAEYDSKKEKALEELKQAEENLARVDLLIKEVKDFEIVERRY
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Known secondary structure (DSSP) T
TTS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence LELKSKREKLEAEKESIIEFINEIEKEKKNVFMRTFEAISRNFSEIFAKLSPGGSARLILENPEDPFSGG
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Known secondary structure (DSSP) STT
S
SSSGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEIEAKPAGKDVKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKE
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Known secondary structure (DSSP)
TTS

GGG

S

SSTTTT

TTT
 .........360.........370.........380.........390........
Sequence SQFIVITLRDVMMANADKIIGVSMRDGVSKVVSLSLEKAMKILEEIRK
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Known secondary structure (DSSP) S


TT
SSSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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