Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xmcA_

Fold library idPDB HeaderMoleculeTitle
c5xmcA_2.60PDB header: ligaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase itchy;


Added to library: Sat Aug 5 08:41:49 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVR
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP)



TT
TTS
TTTTSS





TT
TTS
TTT

SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence NYEQWQLQRSQLQGAMQQFNQRFIYAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMS
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTT
B









STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSPQDLRRRLWVIFPDYGGVAREWFFLLSHEVLNPMYCLFEYADNYCLQINPASYINPDHLKYFRFIGRF
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S
T


TT
GGG





S
GGGGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVWRLSRGVEEQTQAFFEGFNEILP
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) T







TT




TT


SSTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYHYTRTQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPV
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) GGGGTTS

B



T







S
S
S


T
 .........360.........370.........380.........390.........400.........
Sequence GGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE
Predicted secondary structure



























SS confidence


























































Known secondary structure (DSSP) T
GGG
TT


S
SSS

GGGT


S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D