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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xl9B_

Fold library idPDB HeaderMoleculeTitle
c5xl9B_2.39PDB header: viral proteinChain: B: PDB Molecule: hemagglutinin;


Added to library: Sat Aug 5 08:25:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNPVICMGHHAVANGTMVKTLADDQVEVVTAQELVESQNLPELCPSPLRLVDGQTCDIINGALGSPGCDH
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Known secondary structure (DSSP)


B

SS


SS
S
S





SSB

S

TT

T
TT
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNGAEWDVFIERPNAVDTCYPFDVPEYQSLRSILANNGKFEFIAEEFQWNTVKQNGKSGACKRANVNDFF
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Known secondary structure (DSSP) GTT
B
S
TT



SS

TT
B







SSB



TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence NRLNWLVKSDGNAYPLQNLTKINNGDYARLYIWGVHHPSTDTEQTNLYKNNPGGVTVSTKTSQTSVVPNI
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Known secondary structure (DSSP) TT
B

TTS





SSS

SSSSSS

SS




 .........220.........230.........240.........250.........260.........270.........280
Sequence GSRPLVRGQSSRVSFYWTIVEPGDLIVFNTIGNLIAPRGHYKLNNQKKSTILNTAIPIGSCVSKCHTDKG
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Known secondary structure (DSSP)




BTTBS

TT

S

SS






B
S
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLSTTKPFQNISRIAVGDCPRYVKQGSLKLATGMRNIPEIAGFIENGWQGLIDGWYGFRHQNAEGTGTAA
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Known secondary structure (DSSP)



S
S
S



S
S


S
B






SSS

BSS

SSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DLKSTQAAIDQINGKLNRLIEKTNDKYHQIEKEFEQVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQH
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Known secondary structure (DSSP) TTTTTSSS




S





SS


 .........430.........440.........450.........460.........470.........480......
Sequence TIDVTDSEMNKLFERVRRQLRENAEDKGNGCFEIFHKCDNNCIESIRNGTYDHDIYRDEAINNRFQ
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Known secondary structure (DSSP) GGG
SSS
S


TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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