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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xjjA_

Fold library idPDB HeaderMoleculeTitle
c5xjjA_2.90PDB header: transport proteinChain: A: PDB Molecule: multi drug efflux transporter;


Added to library: Sat Sep 23 09:00:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGQLTAELKRVTRLAAPMATVTIAQYLLPVISVMVAGHNGELQLSGVALATSFTNVTGFSIMYGLVGALE
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Known secondary structure (DSSP)
TT



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLCGQAYGAKQYEKIGTYTYSAIASNIPICFIISIIWFYIENILISLGQDPDISRIAGSYAFWLIPVLFA
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Known secondary structure (DSSP) TT
TTTT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAIVIPLTRFLLTQGLVLPLLYTAVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRF
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Known secondary structure (DSSP) TTT
TS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SSSCEKTRGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLFELLILCSGLLSNPKLETSVLSICLTTETLH
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Known secondary structure (DSSP)
GGGTTT



STTTTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YVISSGVAAAVSTRVSNNLGAGNPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFSNSKEVVDYV
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Known secondary structure (DSSP) TT
TTTTGGGGT


 .........360.........370.........380.........390.........400.........410.........420
Sequence ADLSPLLCLSFILDGFTAVLNGVARGSGWQHIGAWNNIFSYYLVGAPVGVYLAFRHDLNGKGLWCGVVIG
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Known secondary structure (DSSP) T
TTTTTT
TT
 .........430.........440........
Sequence STVQATVLAIVTASMNWKEQAEKARKRI
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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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