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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xj2C_

Fold library idPDB HeaderMoleculeTitle
c5xj2C_2.84PDB header: transferase/rnaChain: C: PDB Molecule: uncharacterized rna methyltransferase sp_1029;


Added to library: Sat Nov 4 08:32:48 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKKNDIVEVEIVDLTHEGAGVAKVDGLVFFVENALPSEKILMRVLKVNKKIGFGKVEKYLVQSPHRNQDL
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Known secondary structure (DSSP)

SS



TTS

STT

T

TT

SS


TTB


G
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLAYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIADVEVAETLGMEHPVKYRNKAQVPVRRVNGVL
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Known secondary structure (DSSP) GGTSSTTTT
TTTTB



SS
B


B

SS
SS
BSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHYSGQIMVV
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Known secondary structure (DSSP)

TT

S

S

SSB
TT

BBBTTTTB
S
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence LVTTRPKVFRVDQLIEQVIKQFPEIVSVMQNINDQNTNAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAF
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Known secondary structure (DSSP) SSS

TT
TT

S
SS
S

S

STTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKI
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Known secondary structure (DSSP)

S
T

TT
S
TTTGGGSSSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TNAHYVCDTAENAMKKWLKEGIQPTVILVDPPRKGLTESFIKASAQTGADRIAYISCNVATMARDIKLYQ
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Known secondary structure (DSSP)
SS
T


S


TT


TT
SS
 .........430.........440.........450.
Sequence ELGYELKKVQPVDLFPQTHHVQTVALLSKLD
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Known secondary structure (DSSP) TT

SSTTSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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