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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xixD_

Fold library idPDB HeaderMoleculeTitle
c5xixD_2.25PDB header: ligaseChain: D: PDB Molecule: asparagine--trna ligase, cytoplasmic;


Added to library: Sat May 5 08:35:45 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPKCVKIGALEGYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVA
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Known secondary structure (DSSP)



GGGGGGGTTSTTT
SS
TS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VYGMLNLTPKGKQAPGGHELSCDFWELIGLAPALINEESDVDVQLNNRHMMIRGENMSKILKARSMVTRC
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Known secondary structure (DSSP)

GGG

GGG





STTS
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRDHFFDRGYYEVTPPTLVQTQATLFKLDYFGEEAFLTQSSQLYLETCLPALGDVFCIAQSYRAERHLAE
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Known secondary structure (DSSP) TT




SS





TT
S

SS





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YTHVEAECPFLTFDDLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHD
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Known secondary structure (DSSP) S

STT
TT




SS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VKKEDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVG
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Known secondary structure (DSSP)


TTS



TTS


TS


BGGGS
TTB
B
SS
TTBBSTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GSMRIFDSEEILAGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQ
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Known secondary structure (DSSP) B


TT


GGGGGGTSS


TT
S
GGGGSSS

BTT
 ....
Sequence RCTP
Predicted secondary structure



SS confidence



Known secondary structure (DSSP) B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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