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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xe7A_

Fold library idPDB HeaderMoleculeTitle
c5xe7A_2.16PDB header: dna binding proteinChain: A: PDB Molecule: ecf rna polymerase sigma factor sigj;


Added to library: Sat Jul 22 08:50:58 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EVSEFEALRQHLXSVAYRLTGTVADAEDIVQEAWLRWDSTVIADPRAWLTTVVSRLGLDKLETYTGTWLP
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Known secondary structure (DSSP)
SS
TTT




S





S




 .........80.........90.........100.........110.........120.........130.........140
Sequence EPVVTGLDATDPLAAVVAAEDARFAAXVVLERLRPDQRVAFVLHDGFAVPFAEVAEVLGTSEAAARQLAS
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Known secondary structure (DSSP)



TT

STT
SGGGSTTT
SSSTT


TS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RARKAVTDPAHNEVVGRLXAAXAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQ
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Known secondary structure (DSSP) STT

TTGGGT
SB
TT
TTSSS
S
SS
S
 .........220.........230.........240.........250.........260.........270.......
Sequence RYGPGLFGANQLALVNGELGAYTAGLPGVDGYRAXAPRITAITVRDGKVCALWDIANPDKFTGSPLK
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Known secondary structure (DSSP)
SGGGTTTT




SSS





TT

GGG
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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