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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xa1B_

Fold library idPDB HeaderMoleculeTitle
c5xa1B_6.20PDB header: metal transportChain: B: PDB Molecule: inositol 1,4,5-trisphosphate receptor type 1;


Added to library: Sat Apr 22 08:45:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKA
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Known secondary structure (DSSP)

B
BTT
SSSS
SS



TTT

SSS

SSTTSS





S


 .........80.........90.........100.........110.........120.........130.........140
Sequence STTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTL
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Known secondary structure (DSSP)



STTT
B
BTT


TTT

TTS

SSSSSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence DEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNGCNEVNSVNCNTSWKIVL
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Known secondary structure (DSSP) SS

GGG
SSTTS
TTSB
BSS
TTT
S


S
B
S




S




 .........220.........230.........240.........250.........260.........270.........280
Sequence FMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPC
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Known secondary structure (DSSP)
S


TTTS

TT
TTT

TT


SSSGGG


TTS


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RWNSLFRFKHLATGHYLAAEVMVYSLVSVPEGNDISSIFELDPVPRNSYVRLRHLCTNTWVHSTNIPIEE
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Known secondary structure (DSSP)


S
SSS






BSSTTSGGG





SS


TTTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence EKPVMLKIGTSPLKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDL
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Known secondary structure (DSSP) SS



SS

SS



SSSS


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence VYFVTGGTNSLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFRHICRLCYRVLRHSQQDYRKNQEYIAK
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Known secondary structure (DSSP) TTSS




S




TTTSTTS



TTTTTTSTT
TT
SG
 .........500.........510.........520.........530.........540.........550.........560
Sequence QFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIP
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Known secondary structure (DSSP) GGGGGTTTSSSSGGGGS
SSSS
T

STTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VTQELICKAVLNPTNADILIETKLVLSRFEFEGVSTGENALEAGEDEEEVWLFWRDSNKEIRSKSVRELA
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Known secondary structure (DSSP) TTT







SSSTTS

STT
SS
TTT

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence QDAKEGQKEDRDILSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMSDENLPYDLRASFCRLML
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Known secondary structure (DSSP)


SS

SSSTTS






S

TTTTTS

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence HMHVDSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLRLTK
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Known secondary structure (DSSP)




TTTSSSS




TTTTTG
 .........780.........790.........800.........810.........820.........830.........840
Sequence ILLAILDCVHPEKEDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKREFDESNSQSSGALDFEHIEE
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Known secondary structure (DSSP) GGTTTSSS



TTTTTTSTTTS


SSSS






S
 .........850.........860.........870.........880.........890.........900.........910
Sequence QAEGIFGGSEENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVT
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Known secondary structure (DSSP) S

SS
TTS

TTSSS


TTTTS


SS


 .........920.........930.........940.........950.........960.........970.........980
Sequence SQDVDNYKQIKQDLDQLRSIVEKSELWVYVKEILIRLSKLCVQESASVRKSRKQQQRLLRNMGAHAVVLE
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Known secondary structure (DSSP) S

TTTT


TSS
T

TTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LLQIPYEKAEDTKMQEIMRLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSE
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Known secondary structure (DSSP) SS



TT


TTTTT
SSSSSS
S
TTTTSS




SSS


SSTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence INERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNSGEDVLVFYNDRASFQTLIQ
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Known secondary structure (DSSP) SSSSTTTTTTTSSS
SSGGGTSSTTTSSSTTTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence MMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFL
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Known secondary structure (DSSP) TGGG



S
TTTTSTTTSTTTTTTTSSSS
SS







SS
GGGTSSSTT
 .........1200.........1210.........1220.........1230.........1240.........1250.......
Sequence NHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSP
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Known secondary structure (DSSP) TTSS
SSS


TT

SSSSS





TTSTTTGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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