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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5x9zA_

Fold library idPDB HeaderMoleculeTitle
c5x9zA_7.31PDB header: metal transportChain: A: PDB Molecule: inositol 1,4,5-trisphosphate receptor type 1;


Added to library: Sat Apr 22 09:11:56 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAD
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Known secondary structure (DSSP)



TT
GGG

B


SSS



TTS

SSS

SS
GGG






T

 .........80.........90.........100.........110.........120.........130.........140
Sequence AVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAG
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Known secondary structure (DSSP)
SSS



TTS
B
TTTT
SSSSS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMK
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Known secondary structure (DSSP)
STTSB


BSSTT

TTS


SS




TTT
S


B
S


SSSTT
B


S



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence WSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTSATSATSSKALWEVEVVQHDPCRGGAGY
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Known secondary structure (DSSP) STT

SSS

TT

BTTTTB



GGGS



B



TTS


GGG

SSTTT




 .........290.........300.........310.........320.........330.........340.........350
Sequence WNSLFRFKHLATGHYLAAVYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTN
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Known secondary structure (DSSP) SS


TTTSS





BS


S
TTSSTT


BSS

SS
S


TT

TTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence IPIDKEEEKPVMLKIGTSPLKEEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTK
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Known secondary structure (DSSP) S
SS
SSSS






SS


B



S


 .........430.........440.........450.........460.........470.........480.........490
Sequence LLEDLVYFVTKPNRERQKLMREQNILKQIFKLLHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGY
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Known secondary structure (DSSP)



TT




TTSS

GGGGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence DVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVL
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Known secondary structure (DSSP)
STTS
S
GGG
SS


SGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence NPTNADILIETKLVLSRFEFEGVSTGENALEAGEDEEEVWLFWRDSNKEIRSKSVRELAQDAKEGQKEDR
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Known secondary structure (DSSP) TTTTS


STTTT
ST

S

S





SS
TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence DILSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMSDENLPYDLRASFCRLMLHMHVDSKDEIK
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Known secondary structure (DSSP) TS









ST
SS

S


 .........710.........720.........730.........740.........750.........760.........770
Sequence ERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLRLTKILLAILDCVHV
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Known secondary structure (DSSP) S


TTT

TTT

 .........780.........790.........800.........810.........820.........830.........840
Sequence PEKEDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKREFDESNSQSSGALDFEHIEEQAEGIFGGSE
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Known secondary structure (DSSP)
TTTTTTTTT



SS







STTTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence ENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQI
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Known secondary structure (DSSP)
SS
SSS

TTSSS


STTTTS


STT

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence KQDLDQLRSIVEKSELWVYVKEILIRLSKLCVQESASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAE
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Known secondary structure (DSSP) GGGTTTT


TSS
T
TTTTTTTTTSS



SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence DTKMQEIMRLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFV
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Known secondary structure (DSSP) S

TTGGG
SSSSSS
S
TTTTS





SSS


TTS

TTST
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence HCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNSGEDVLVFYNDRASFQTLIQMMRSERDRMD
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Known secondary structure (DSSP) TTTTTTTTSSTT
SS
TTTTTTTTSTTTTTTTTTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVE
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Known secondary structure (DSSP)


STTTTTTTTTSTTTTGGGSSSS
SS







SS
T
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence MKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPSRDYRNIIERLQD
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Known secondary structure (DSSP) SS

TTT

SSSS






STSS



 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence IVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVL
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Known secondary structure (DSSP) TTT
TTTTTTTT


TT


S
TTSS

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence QTLREMMTKDRGMSLAEVQCHLDKEGASNLVIDLIMNASSDRVFHESILLAIALLEGGNTTIQHSFFCRL
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Known secondary structure (DSSP) TTGGGTTT

TT
SGGGGGSTTTTTTT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence TEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDDEKAKDDLEMSAVITIMQPILRFLQLLCE
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Known secondary structure (DSSP) SGGGS
S

S







TT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence NHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPC
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Known secondary structure (DSSP)

S

S
SS

TSS
SSS


T
STS

 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence HENQNCIATHESNGIDIITALILNDINPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRP
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Known secondary structure (DSSP) SSTT

SS
SSS

STTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence KELVEVIKKAYMQGEVEFEDGENGEDGAASPRNVGHNIYILAHQLARHNKELQTMLKPGGQVDGDEALEF
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Known secondary structure (DSSP) TT

S
SS
SS

SGGGS
SS

SS
 .........1690.........1700.........1710
Sequence YAKHTAQIEIVRLDRTMEQIVFPVPSICEF
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Known secondary structure (DSSP) TTS








TTTS











Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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