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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5x9wA_

Fold library idPDB HeaderMoleculeTitle
c5x9wA_3.30PDB header: dna binding proteinChain: A: PDB Molecule: dna mismatch repair protein muts;


Added to library: Sat Nov 25 08:30:00 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QSMSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGVPIKMAGVP
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Known secondary structure (DSSP)



SSSS

SSSTTT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FHAAEQYLARLVKLGKSVAICEQVGEPVERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWA
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Known secondary structure (DSSP) GGGTT




TTS


TTTS
TT




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLQSGEFKTKLTTADKLNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQ
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Known secondary structure (DSSP)
TTT

STTT
S
SSTT






S
TTGGG
T
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLRGFGLDSKEHAVSIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEITQTLSGKKT
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Known secondary structure (DSSP)
SGGGT

TTTTSSS








TTSB

TTSSS
TTSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAVTALESQYEPLQCHLKSIADIERIAARIAVG
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Known secondary structure (DSSP) S



SS

BS
GGGSGGG


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence NARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFPETLPVAETLKAAVMPEPSVWLKDGNVINHGFH
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Known secondary structure (DSSP)


TTTTT


SSTTGGGB
SS

SSGGG


B
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PELDELRRIQNHGDEFLLDLEAKERERTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAER
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Known secondary structure (DSSP) TTT
SS

TTT

TT

TTS



B
SS
B
 .........500.........510.........520.........530.........540.........550.........560
Sequence FITPELKAFEDKVLTAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERNFVRP
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Known secondary structure (DSSP)

TT
B

 .........570.........580.........590.........600.........610.........620.........630
Sequence EFADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVP
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Known secondary structure (DSSP)
SSS


TTGGGSSSS



SS



SSSSTTT

BS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ADAATIGPVDQIFTRISTFMVEMSETAYILHHATEQSIVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKS
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Known secondary structure (DSSP) SS








STT

TT
STT
SS
SSTTTT

 .........710.........720.........730.........740.........750.........760.........770
Sequence FSLFATHYFELTYLPEAHAAAVNMHLSALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQK
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Known secondary structure (DSSP)
S
GGGTTSTTT
SS

SSSS



S




SGGGGGG

S


S
 .
Sequence H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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