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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5x3qB_

Fold library idPDB HeaderMoleculeTitle
c5x3qB_4.20PDB header: lipid binding proteinChain: B: PDB Molecule: envelope glycoprotein;


Added to library: Sat Feb 24 08:28:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRDVNVFKKVLENIGNAVTQFNNDILAYTGGDANHLIHDGDAIIKATENGLQELGPQPPLSLTEALALVG
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Known secondary structure (DSSP)

ST

SS

TT




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PVQGVNKLIMKTVDHLIEKKGPLVGGGYGPQVKASLQKQAHAAVTLSELVSSKVPSPLAPISKQLSDQVA
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Known secondary structure (DSSP) TT
TTTS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QALQKGIEAFSISARQATKVKRDISAFQKVIQDISLAVNKFNVDIERYVGGDASHLLADGNVLIKATLDG
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Known secondary structure (DSSP) SSTTSS










SS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VQSLQNEPPLSSMEALALVGPVQDLSNQILLAIQNLIDKKEPLVQAGFGGKVENNLRQQEEAAQKLSELV
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Known secondary structure (DSSP) TSSS



TSSSTTTT
 .........290.........300.........310...
Sequence STKVPHELADISRQLSDGIAAGIKKGIDAFAGT
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Known secondary structure (DSSP) S
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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