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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5wwnA_

Fold library idPDB HeaderMoleculeTitle
c5wwnA_2.81PDB header: rna binding proteinChain: A: PDB Molecule: ribosome biogenesis protein tsr1;


Added to library: Sat Jul 1 08:33:32 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAKIITIVPLVNDLDPLDILYKLLKCADDEGIMVQKRIFNVHIKKFKSNLKIIIPDMTNFLNILDCAKVA
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Known secondary structure (DSSP)

SSTTS
TSS
T


TTTT


TT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFVVFGLSGVQEVDEEFGEQIIRALELQGIASYIGVISNLSAVHEKEKFQLDVKQSLESYFKHFFPSEER
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Known secondary structure (DSSP) S
SSS


TTTT


S
GGGS
S
TT
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence VYNLEKNSDALNVLRTLCQRLPRSINWRDNRGYVVADFVDFVETSPDSGDLVIEGTVRGIGFNANRLVHI
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Known secondary structure (DSSP) TTSS




TS
S
SSST
B
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDFGDFQLNKIEKEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRGLKNLYNCDWQVDEKRLLR
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Known secondary structure (DSSP) TTT

STTB



TTS
TTT

S
GGG



S




B
 .........290.........300.........310.........320.........330.........340.........350
Sequence IGNYKNTKNRIIKETKNEAQAIAGDRIRMFIRFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFSLQR
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Known secondary structure (DSSP)
S
T
SB
TT
GGGTTT


TTTS



TTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence WEQYDKPVPSQEPIVVQYGVRRYTIQPLFSQGPNNVHKYERFLHPDTVSVATCIAPVDFTQSPAIFFKPS
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Known secondary structure (DSSP)
TT

S

BTTS
TT





SSB

SSS


SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence PAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFKSIPLFTKSGRSGFI
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Known secondary structure (DSSP)


S
TT
TTSS
SSTTTS
TTS
 .........500.........510.........520.........530.
Sequence KESLGTHGYFKATFDGKLSAQDVVAMSLYKRMWPMPSLPWN
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Known secondary structure (DSSP) TTTTSS


TT




B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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