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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5wuaF_

Fold library idPDB HeaderMoleculeTitle
c5wuaF_5.60PDB header: transport proteinChain: F: PDB Molecule: sur1;


Added to library: Fri Feb 10 00:30:49 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FVDALNVVPHVFLLFITFPILFIGWGSSTWLHFPGHNLRWILTFILLFVLVCEIAEGILSDGVTESRHLH
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Known secondary structure (DSSP)
T






SSTSSSSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYMPAGMAFMAAITSVVYYHNIETSNFPKLLIALLIYWTLAFITKTIKFVKFYDHAIGFSQLRFCLTGLL
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Known secondary structure (DSSP) TTT


SGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence VILYGMLLLVEVNVIRVRRYIFFKTPREVKPPEDLQDLNLLSKGTYWWMNAFIKTAHKKPIDLRAIGKLP
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Known secondary structure (DSSP) TTT

SSGGG



S



S
SSS


TTGGGS


TTTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence IAMRALTNYQRLCVAFDAQRAIWRALCHAFGRRLILSSTFRILADLLGFAGPLCIFGIVDHNAYVLAVLL
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Known secondary structure (DSSP) STT
T



TTTGGGTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence FLALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMHLSTSNLSMGEMTAGQICNLVAIDTNQLMWFF
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Known secondary structure (DSSP) B
GGGGGTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLCPNLWAMPVQIIVGVILLYYILGVSALIGAAVIILLAPVQYFVATKLSQAQRSTLEHSNERLKQTNEM
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Known secondary structure (DSSP) TSSS
SSTTSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRGMKLLKLYAWESIFCSRVEVTRRKEMTSLRAFAVYTSISIFMNTAIPIAAVLITFVGHVSFFKESDLS
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Known secondary structure (DSSP) TTTT

STSS
TT


 .........500.........510.........520.........530.........540.........550.........560
Sequence PSVAFASLSLFHILVTPLFLLSSVVRSTVKALVSVKKLSEFLSSAEIREDADNFCVQIIGGFFTWTPDGI
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Known secondary structure (DSSP) TS
B




TTS
S
BB

TTTSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence PTLSNITIRIPRGQLTMIVGQVGCGKSSLLLATLGEMQKVSGAVFWNSNLPVAYASQKPWLLNATVEENI
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Known secondary structure (DSSP)
SSB



TT


S

TTTTTTTTSS
B
SS
SS







SS



S
 .........640.........650.........660.........670.........680.........690.........700
Sequence TFESPFNKQRYKMVIEACSLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQQTNVVFLDDPFS
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Known secondary structure (DSSP) S
SS


TTTTSSSGGGSSSSS



TT

S





TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence ALDVHLSDHLMQAGILELLRDDKRTVVLVTHKLQYLPHADWIIAMKDGTIQREGTLKDFQRSECQLFEHW
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Known secondary structure (DSSP) T

STTTSTTSTTS



S
SSSGGG
STT
TTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence KTLWRACTKYLSSAGILLLSLLVFSQLLKHMVLVAIDYWLAKWTDSLDQSVYAMVFTLLCSLGIVLCLVT
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Known secondary structure (DSSP)


TTGGGS
T

 .........850.........860.........870.........880.........890.........900.........910
Sequence SVTVEWTGLKVAKRLHRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTLLCVS
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Known secondary structure (DSSP) S

SSSTTTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ALTVISYVTPVFLVALLPLAVVCYFIQKYFRVASRDLQQLDDTTQLPLLSHFAETVEGLTTIRAFRYEAR
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Known secondary structure (DSSP) SS

TTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence FQQKLLEYTDSNNIASLFLTAANRWLEVRMEYIGACVVLIAAATSISNSLHRELSAGLVGLGLTYALMVS
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Known secondary structure (DSSP)







SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence NYLNWMVRNLADMEIQLGAVKRIHALLKTEKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGS
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Known secondary structure (DSSP) T



B
SSSSSB
S


SSB
B

SS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence GKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWE
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Known secondary structure (DSSP) TTSS

STTB
TTTS
TTSS



SS




S
S
SSS

 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence ALEIAQLKLVVKALPGGLDGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFA
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Known secondary structure (DSSP) TTTTTS
SS





TTTT
SSSTTTTS
TTTTTS
 .........1270.........1280.........1290.........1300.........1310..
Sequence DRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPETLLSQKDSVFASFVRAD
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Known secondary structure (DSSP) SS
SS
GGGSS
SB

TT


S
TTSSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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