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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5wu5C_

Fold library idPDB HeaderMoleculeTitle
c5wu5C_3.40PDB header: transferaseChain: C: PDB Molecule: speckle targeted pip5k1a-regulated poly(a) polymerase;


Added to library: Sat Jun 3 08:30:11 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence DSHQLAKALAEAADVGAQMIKLVGLRELSEAERQLRSLVVALMQEVFTEFFPGCVVHPFGSSINSFDVHG
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Known secondary structure (DSSP)

TSSSS

STT
GGGTSS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence CDLDLFLDLGDLAEGAAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHN
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Known secondary structure (DSSP)







TSTT
SSSS
TTTTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence SRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGPLLSNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGE
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Known secondary structure (DSSP)
TTT
BSSSSSB
SSSS
SS



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GEQVEVDGWDCSFPRDASRLEPSINVEPLSSLLAQFFSAVSSWDLRGSLLSLREGQALPVAGGLPSNLWE
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Known secondary structure (DSSP) T


TT



S
TTSS







S
SSSTTTTTTT

GGGS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLRLGPLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSPSS
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Known secondary structure (DSSP) T


SSS
SS
TT
BTTTT

TSS

SS
S

TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence LLSATPIPLPLAPFTQLTAALVQVFREALGCHIEQSASWRCALWHRVWQGRRRARRRLQQQTKEGGWLAT
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Known secondary structure (DSSP) S


S

SSS



SS

SS



T
 .........430.........440.........450.........460.........470.........480.....
Sequence EAQVTQELKGERPETEPLLSFVASVSPADRMLTVTPLQDPQGLFPDLHHFLQVFLPQAIRHLKLE
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Known secondary structure (DSSP) TT




SSS
S
SSS

TT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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