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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5wqeA_

Fold library idPDB HeaderMoleculeTitle
c5wqeA_3.13PDB header: rna binding proteinChain: A: PDB Molecule: crispr-associated endonuclease c2c1;


Added to library: Fri Feb 10 07:31:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVKSIKVKLRLDDXPEIRAGLWKLHKEVNAGVRYYTEWLSLLRQENLYRRSPQECDKTAEECKAELLERL
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Known secondary structure (DSSP)
B


S
SS






 .........80.........90.........100.........110.........120.........130.........140
Sequence RARQVENGHRGPAGSDDELLQLARQLYELLVPQAIGAKGDAQQIARKFLSPLADKDAVRTADVLRALADF
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Known secondary structure (DSSP) S


S




GGGGT





S



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLKPLXRVYTDSEXSSVEWKPLRKGQAVRTWDRDXFQQAIERXXSWESWNQRVGQEYAKLVEQKNRFEQK
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Known secondary structure (DSSP) T
SS
S

SSSSSS


B
S


TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence NFVGQEHLVHLVNQLQQDXKEATGRALRGSDKVFEKWGKLAPDAPFDLYDAEIKNVQRRNTRRFGSHDLF
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Known secondary structure (DSSP) STT
T


TT

TTTTS
SSS

S



 .........290.........300.........310.........320.........330.........340.........350
Sequence AKLAEPEYQALWREDASFLTRYAVYNSILRKLNHAKXFATFTLPDATAHPIWTRFDKLGGNLHQYTFLFN
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Known secondary structure (DSSP) TSTTTSS
STTS
SS






SSSS



SSSSSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EFGERRHAIRFHKLLKVENGVAREVDDVTVPISXSEQLDNLLPRDPNEPIALYFRDYGAEQHFTGEFGGA
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Known secondary structure (DSSP) SSSSS

T
TT
SB


S
SSSTT
SSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence KIQCRRDQLAHXHGARDVYLNVSVRVQSQSEARGERRPPYAAVFRLVGDNHRAFVHFDKLSDYLAEHPDD
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Known secondary structure (DSSP)

TTGGGT







TT
SS
TTTTTTTTT
STS


 .........500.........510.........520.........530.........540.........550.........560
Sequence GKLGSEGLLSGLRVXSVDLGLRTSASISVFRVARKDELKPNSKGRVPFFFPIKGNDNLVAVHERSQLLKL
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Known secondary structure (DSSP) S

SSGGGTT


SSSSTTTTTT

SSS



SS
SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence PGETESKDLRAIREERQRTLRQLRTQLAYLRLLVRCGSEDVGRRERSWAKLIEQPVDAANHXTPDWREAF
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Known secondary structure (DSSP) GGG


T
SSTTSS
S
TTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ENELQKLKSLHGICSDKEWXDAVYESVRRVWRHXGKQVRDWRKDVRSGERPKIRGYAKDVVGGNSIEQIE
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Known secondary structure (DSSP) S
S






S

SS
SSTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YLERQYKFLKSWSFFGKVSGQVIRAEKGSRFAITLREHIDHAKEDRLKKLADRIIXEALGYVYALDERGK
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Known secondary structure (DSSP) SSS





S

S
TT
SSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence GKWVAKYPPCQLILLEELSEYQFNNDRPPSENNQLXQWSHRGVFQELINQAQVHDLLVGTXYAAFSSRFD
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Known secondary structure (DSSP)

S


S


SS

TTSS
TTT
STTTTT


SSTTTB
 .........850.........860.........870.........880.........890.........900.........910
Sequence ARTGAPGIRCRRVADDLIPTGEGEIFVSPFSAEEGDFHQIHADLNAAQNLQQRLWSDFDISQIRLRCDWG
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Known secondary structure (DSSP) TTT

B
S





S
SSSSSTT

GGGT
 .........920.........930.........940.........950.........960.........970.........980
Sequence EVDGELVLIPRLTGKRTADSYSNKVFYTNTGVTYYEREREKLSEEEAELLVEADEAREKSVVLXRDPSGI
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Known secondary structure (DSSP) SSSS


STTTT

SSSS





TTS

SSST
 .........990.........1000.........1010.
Sequence INRGNWTRQKEFWSXVNQRIEGYLVKQIRSR
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Known secondary structure (DSSP) TTSS
T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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