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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5whzL_

Fold library idPDB HeaderMoleculeTitle
c5whzL_3.55PDB header: immune systemChain: L: PDB Molecule: anti-hiv codv-fab light chain;


Added to library: Sat Oct 14 08:51:33 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFVLTQSPHSLSVTPGESASISCKSSHSLIHGDRNNYLAWYVQKPGRSPQLLIYLASSRASGVPDRFSGS
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Known secondary structure (DSSP)


SS
TTSSS

B
TTS
B

TTS

TTT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GSDKDFTLKISRVETEDVGTYYCMQGRESPWTFGQGTKVDIKDKTHTASELTQDPAVSVALKQTVTITCR
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Known secondary structure (DSSP) TTS

STT

SSSS








SS


SBB


TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GDSLRSHYASWYQKKPGQAPVLLFYGKNNRPSGIPDRFSGSASGNRASLTITGAQAEDEADYYCSSRDKS
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Known secondary structure (DSSP)
GGGGS



TTS

BTTTB

SSS
TTTTSS

GGG
S
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSRLSVFGGGTKLTVLDKTHTRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
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Known secondary structure (DSSP) S
S

B




S



B





TTTTTTTS
BSS

SSSS

S
 .........290.........300.........310.........320.........330......
Sequence GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
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Known secondary structure (DSSP) S







SSS


TT
S


SS

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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