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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5wb1A_

Fold library idPDB HeaderMoleculeTitle
c5wb1A_3.51PDB header: membrane proteinChain: A: PDB Molecule: envelope protein us28, nanobody 7 fusion protein;


Added to library: Sat Jun 16 09:10:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQ
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Known secondary structure (DSSP)



SSS


STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLLDHNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIP
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Known secondary structure (DSSP)
STTS
TS




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLI
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Known secondary structure (DSSP) SS



SSS
S

TTSS
TTTTTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQE
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Known secondary structure (DSSP) TTSS


TTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LHCLLAEFRLVPRGPRGSQVQLVESGGGLVRPGGSLRLSCAASGSIFTIYAMGWYRQAPGKQRELVARIT
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Known secondary structure (DSSP) S





SSS





TT
SS




TTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence FGGDTNYADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCNAEETIVEEADYWGQGTQVTVSSRLEV
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Known secondary structure (DSSP) TTS

TTTBTTTTTTS

GGG
SSS



B


S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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