PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5w6yB_

Fold library id	PDB Header	Molecule	Title
c5w6yB_	2.00	PDB header: biosynthetic protein,isomerase	Chain: B: PDB Molecule: chorismate mutase;

Links to external resources
Added to library: Sat Oct 14 08:20:25 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E P F T L A N I R E S L I R Q E D T I I Y A L L Q R A Q F S F N A P T Y D E N S F S I P G F K G S L V E F M L K E T E T L H A K V R R Y Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T S
G G G G
T T S
T T
S
T T G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P D E H P F F P E D L S Q P R V L H P A A E K I N I N K S I W S M Y L Q D L L P K L T V P D D D G N Y G S A S V C D V L C L Q A L S K R I H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G
S
G G G G G
T S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y G K F V A E A K F I E D P A R F E G H I K A Q D G D A I L R E L T F K N V E D N V K R R V A N K A R A Y G Q E R Y K I D P D L A G A L Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T
B
B S S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence D W V M P L T K Q V Q V A Y L L R R L D W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	P	F	T	L	A	N	I	R	E	S	L	I	R	Q	E	D	T	I	I	Y	A	L	L	Q	R	A	Q	F	S	F	N	A	P	T	Y	D	E	N	S	F	S	I	P	G	F	K	G	S	L	V	E	F	M	L	K	E	T	E	T	L	H	A	K	V	R	R	Y	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																							T	T	S				G	G	G	G		T	T	S				T	T			S																	T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	D	E	H	P	F	F	P	E	D	L	S	Q	P	R	V	L	H	P	A	A	E	K	I	N	I	N	K	S	I	W	S	M	Y	L	Q	D	L	L	P	K	L	T	V	P	D	D	D	G	N	Y	G	S	A	S	V	C	D	V	L	C	L	Q	A	L	S	K	R	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				S		G	G	G							S		G	G	G	G	G														T						S		S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	K	F	V	A	E	A	K	F	I	E	D	P	A	R	F	E	G	H	I	K	A	Q	D	G	D	A	I	L	R	E	L	T	F	K	N	V	E	D	N	V	K	R	R	V	A	N	K	A	R	A	Y	G	Q	E	R	Y	K	I	D	P	D	L	A	G	A	L	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T									T	T																												T	T		B			B	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	D	W	V	M	P	L	T	K	Q	V	Q	V	A	Y	L	L	R	R	L	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T														T	T	T	T