Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5w6lA_

Fold library idPDB HeaderMoleculeTitle
c5w6lA_3.45PDB header: toxinChain: A: PDB Molecule: rtx repeat-containing cytotoxin;


Added to library: Sat Jun 30 08:18:48 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NAQELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIAEHPTSGRNQALTQLKE
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

SSS
SS




T
SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVTSALFIGKXQVAQAGIDAIAQTRPELAARIFXVAIEEANGKHVGLTDXXVRWANEDPYLAPKHGYKGE
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
GGGGGGTT
TTSSTT
GGGS





S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPSDLGFDAKYHVDLGEHYADFKQWLETSQSNGLLSKATLDESTKTVHLGYSYQELQDLTGAESVQXAFY
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S

SS

S
TTTTT
S
STTTT
S
TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLKEAAKKADPISGDSAEXILLKKFADQSYLSQLDSDRXDQIEGIYRSSHETDIDAWDRRYSGTGYDELT
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

SS


B
S
STT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NKLASATGVDEQLAVLLDDRKGLLIGEVHGSDVNGLRFVNEQXDALKKQGVTVIGLEHLRSDLAQPLIDR
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S
STTSS


TTT

TTSSS
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YLATGVXSSELSAXLKTKHLDVTLFENARANGXRIVALDANSSARPNVQGTEHGLXYRAGAANNIAVEVL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)



TT

TT



GGG




TTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QNLPDGEKFVAIYGKAHLQSHKGIEGFVPGITHRLDLPALKVSDSNQFTVEQDDVSLRVVYDDVANKPKI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TS
TT


S
BSSS

T


TTS




GGGSSB
TTTTT



 ....
Sequence TFKG
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D