PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5w1rA_

Fold library id	PDB Header	Molecule	Title
c5w1rA_	4.40	PDB header: dna binding protein	Chain: A: PDB Molecule: dna-dependent protein kinase catalytic subunit;

Links to external resources
Added to library: Sat Jul 22 08:49:28 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V R C S L L R L Q E T L S A A D R C G A A L A G H Q L I R G L G Q E C V L S A V L A L Q T S L V F S R D F G L L V F V R K S L N S I E F R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T T T
T T T T
T T T T T T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C R E E I L K F L C I F L E K M G Q K I A P Y S V E I K N T C T S V Y T K D R A L D L L I K L L Q T F R S S R L M D E F K I G E L F S K F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T
T T S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G E L A L K K K I P D T V L E K V Y E L L G L L G E V H P S E M I N N A E N L F R A F L G E L K T Q M T S A V R E P K L P V L A G C L K G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
T T T T S T T T T T S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S S L L C N F T K S M E E D P Q T S R E I F N F V L K A I R P Q I D L K R Y A V P S A G L R L F A L H A S Q F S T C L L D N Y V S L F E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T T T S
S S T G G G T S S T T T S S S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L K W C A H T N V E L K K A A L S A L E S F L K Q V S N M V A K N A E M H K N K L Q Y F M E Q F Y G I I R N V D S N N K E L S I A I R G Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T S
S S
T T T S
T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence L F A G P C K V I N A K D V D F M Y V E L I Q R C K Q M F L T Q T D T G D D R V Y Q M P S F L Q S V A S V L L Y L D T V P E V Y T P V L E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S G G G G T S
T G G G S S S S
S
S T T
S
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L V V M Q I D S F P Q Y S P K M Q L V C C R A I V K V F L A L A A K G P V L R N C I S T V V H Q G L I R I C S K P V V L K D Y V D L F R H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S
T T T T S S
S
T T T T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence L S S D Q M A D E A F F S V N S S S E S L N H L L Y D E F V K S V L K I V E K L D L T L E I Q T V G E Q E N G D E A P G V T S D P A A N L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T S S
S S S
S
T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence P A K P K D F S A F I N L V E F C R E I L P E K Q A E F F E P W V Y S F S Y E L I L Q S T R L P L I S G F Y K L L S I T V R N A K K I K Y D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S S
T T
T
S S
T T T
T T T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence P E K Y S C F A L F V K F G K E V A V K M K Q Y K D E L L A S C L T F L L S L P H N I I E L D V R A Y V P A L Q M A F K L G L S Y T P L A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S T T T T T T S S S T T S T T T T S
T T T S T T S S S T T T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence V G L N A L E E W S I Y I D R H V M Q P Y Y K D I L P C L D G Y L K T S A L S I S L E E I R I R V V Q M L G S L G G Q I N K N L L T V T S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T G G G G
T T S S S
S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence D E M M K S Y V A W D R E M K P V I F L D V F L P R V T E L A L T A S D R Q T K V A A C E L L H S M V M F M L G K A T Q M P E G G Q G A P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T
S
T T T T
G G G T T S S
S T T T T T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence M Y Q L Y K R T F P V L L R L A C D V D Q V T R Q L Y E P L V M Q L I H W F T N N K K F E S Q D T V A L L E A I L D G I V D P V D S T L R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T T S T
S S T T T T T G G G T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence F C G R C I R E F L K W S I K Q I T P Q Q Q E K S P V N T K S L F K R L Y S L A L H P N A F K R L G A S L A F N N I Y R E F R E E E S L V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T T T S
S T T T T T T S
S T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Q F V F E A L V I Y M E S L A L A H A D E K S L G T I Q Q C C D A I D H L C R I I E K K H V S L N K A K K R R L P R G F P P S A S L C L L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S
T T
T T T T
T T T
T T T T T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L V K W L L A H C G R P Q K E E G V S F L I N T F E G G G C G Q P S G I L A Q P T L L Y L R G P F S L Q A T L C W L D L L L A A L E C Y N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
T T T T
S
S
T T
S T T
S S T T T S T T G G G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence F I G E R T V G A L Q V L G T E A Q S S L L K A V A F F L E S I A M H D I I S P Q E G E R Y N Y S K C T V V V R I M E F T T T L L N T S P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T T S S S S S
T T S S S
T T S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence G W K L L K K D L C N T H L M R V L V Q T L C E P A S I G F N I G D V Q V M A H L P D V C V N L M K A L K M S P Y K D I L E T H L R E K I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S T T
S S T T T T T T T S S S
S T T T T T T T S T T T T T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence A Q S I E E L C A V N L Y G P D A Q V D R S R L A A V V S A C K Q L H R A G L L H N I L P S Q S T D L H H S V G T E L L S L V Y K G I A P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S S S
G G G G S S S T T T S S T T T
T T T T T T T S S
T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence D E R Q C L P S L D L S C K Q L A S G L L E L A F A F G G L C E G S V I H F S H G E Y F Y S L F S E T I N T E L L K N L D L A V L E L M Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
T S
S T T G G G
T T T T T S S T T
T T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence S V D N T K M V S A V L N G M L D Q S F R E R A D S W W A K D S P L E T K M A V L A L L A K I L Q I D S S I S L L A D T K L D L H L K G Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T S T T S T T T T T T T T T
T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence V T L L P F F T S L T G G S L E E L R R V L E Q L I V A H F P M Q S R E F P P G T P R F N N Y V D C M K K F L D A L E L S Q S P M L L E L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G
S S S S
S T T T T T S
S
S S T T T S
S

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence T L E S V Y E M F R K D D P R L S F T R Q S K L N E S T F D T Q I T K K M G Y Y K I L D V M Y S R L P K D D V H A K E S K I N Q V F H G S C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T S S S S
S S T T
S S G G G T
S G G G S S S
T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence I T E G N E L T K T L I K L C Y D A F T E N M A G E N Q L L E R R R L Y H C A A Y N C A I S V I C C V F N E L K F Y Q G F L F S E K P E K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T S S
S S S
T S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence L L I F E N L I D L K R R Y N F P V E V E V P M E R K K K Y I E I R K E A R E A A N G D S D G P S Y M S S L S Y L A D S T L S E E M S Q F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T T T S S S
S
S S S T T T T

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence F S T G V Q S Y S Y S S Q D P R P A T G R F R R R E Q R D P T V H D D V L E L E M D E L N R H E C M A P L T A L V K H M H R S L G S V P R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
T T T S S
S
S S
S S
S
T T S S S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence L P S W M K F L H G K L G N P I V P L N I R L F L A K L V I N T E E V F R P Y A K H W L S P L L Q L A A S E N N G G E G I H Y M V V E I V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S T T T
S S S T T T T S S
G G G
S T S T T T S
T T
T T

. . . . . . . . . 1900 . . . . . . . . . 1910 . . . . . . . . . 1920 . . . . . . . . . 1930 . . . . . . . . . 1940 . . . . . . . . . 1950 . . . . . . . . . 1960

Sequence T I L S W T G L A T P T G V P K D E V L A N R L L N F L M K H V F H P K R A V F R H N L E I I K T L V E C W K D C L S I P Y R L I F E K F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T T T S S S
S S
T T T T
T
S

. . . . . . . . . 1970 . . . . . . . . . 1980 . . . . . . . . . 1990 . . . . . . . . . 2000 . . . . . . . . . 2010 . . . . . . . . . 2020 . . . . . . . . . 2030

Sequence G K D P N S K D N S V G I Q L L G I V M A N D L P P Y D P Q C G I Q S S E Y F Q A L V N N M S F V R Y K E V Y A A A A E V L G L I L R Y V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T T T S S S S S S
S S
S
S S S S

. . . . . . . . . 2040 . . . . . . . . . 2050 . . . . . . . . . 2060 . . . . . . . . . 2070 . . . . . . . . . 2080 . . . . . . . . . 2090 . . . . . . . . . 2100

Sequence E R K N I L E E S L C E L V A K Q L K Q H Q N T M E D K F I V C L N K V T K S F P P L A D R F M N A V F F L L P K V L K T L C L E V V L C R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S T T S
S T T
T G G G G T S
T T T T T T T
T

. . . . . . . . . 2110 . . . . . . . . . 2120 . . . . . . . . . 2130 . . . . . . . . . 2140 . . . . . . . . . 2150 . . . . . . . . . 2160 . . . . . . . . . 2170

Sequence V E G M T E L Y F Q L K S K D F V Q V M R H R D D E R Q K V C L D I I Y K M M P K L K P V E L R E L L N P V V E F V S H P S T T C R E Q M Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S
T T T T
S G G G T G G G S S S
T T S S S
T T

. . . . . . . . . 2180 . . . . . . . . . 2190 . . . . . . . . . 2200 . . . . . . . . . 2210 . . . . . . . . . 2220 . . . . . . . . . 2230 . . . . . . . . . 2240

Sequence N I L M W I H D N Y R D P E S E T D N D S Q E I F K L A K D V L I Q G L I D E N P G L Q L I I R N F W S H E T R L P S N T L D R L L A L N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T T S S
S
T T S S S S
S S S

. . . . . . . . . 2250 . . . . . . . . . 2260 . . . . . . . . . 2270 . . . . . . . . . 2280 . . . . . . . . . 2290 . . . . . . . . . 2300 . . . . . . . . . 2310

Sequence L Y S P K I E V H F L S L A T N F L L E M T S M S P D Y P N Y R H G D L P D I Q I K H S S L I T P L Q A V A Q R D P I I A K Q L F S S L F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T S S S S
S S S S S
S S S T T T S S S
T

. . . . . . . . . 2320 . . . . . . . . . 2330 . . . . . . . . . 2340 . . . . . . . . . 2350 . . . . . . . . . 2360 . . . . . . . . . 2370 . . . . . . . . . 2380

Sequence G I L K E M D K F K T L S E K N N I T Q K L L Q D F N R F L N T T F S F F P P F V S C I Q D I S C Q H A A L L S L D P A A V S A G C L A S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T S T T
S S T T T T
S S
T T T T

. . . . . . . . . 2390 . . . . . . . . . 2400 . . . . . . . . . 2410 . . . . . . . . . 2420 . . . . . . . . . 2430 . . . . . . . . . 2440 . . . . . . . . . 2450

Sequence Q Q P V G I R L L E E A L L R L A K R V R G K A R L P P D V L R W V E L L Y R S I G E Y D V L R G I F T S E I G T K Q I T Q S A L L A E A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
S S
T T T T S S S T T
T T T S
T T T S

. . . . . . . . . 2460 . . . . . . . . . 2470 . . . . . . . . . 2480 . . . . . . . . . 2490 . . . . . . . . . 2500 . . . . . . . . . 2510 . . . . . . . . . 2520

Sequence S D Y S E A A K Q Y D E A L N K Q D W V D G E P T E A E K D F W E L A S L D C Y N H L A E W K S L E Y C S T A S I D S E N P P D L N K I W S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S
T T T T T S S S S
T T S
S S
S T

. . . . . . . . . 2530 . . . . . . . . . 2540 . . . . . . . . . 2550 . . . . . . . . . 2560 . . . . . . . . . 2570 . . . . . . . . . 2580 . . . . . . . . . 2590

Sequence E P F Y Q E T Y L P Y M I R S K L K L L L Q G E A D Q S L L T F I D K A M H G E L Q K A I L E L H Y S Q E L S L L Y L L Q D D V D R A K Y Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S G G G T S S
T T T T T T T T T
T T T T T

. . . . . . . . . 2600 . . . . . . . . . 2610 . . . . . . . . . 2620 . . . . . . . . . 2630 . . . . . . . . . 2640 . . . . . . . . . 2650 . . . . . . . . . 2660

Sequence I Q N G I Q S F M Q N Y S S I D V L L H Q S R L T K L Q S V Q A L T E I Q E F I S F I S K Q G N L S S Q V P L K R L L N T W T N R Y P D A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
S S

. . . . . . . . . 2670 . . . . . . . . . 2680 . . . . . . . . . 2690 . . . . . . . . . 2700 . . . . . . . . . 2710 . . . . . . . . . 2720 . . . . . . . . . 2730

Sequence M D P M N I W D D I I T N R C F F L S K I E E K L I S S L I R S C K F S M K M K M I D S A R K Q N N F S L A M K L L K E L H K E S K T R D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
G G G G S S
S T
S S

. . . . . . . . . 2740 . . . . . . . . . 2750 . . . . . . . . . 2760 . . . . . . . . . 2770 . . . . . . . . . 2780 . . . . . . . . . 2790 . . . . . . . . . 2800

Sequence W L V S W V Q S Y C R L S H C R S R S Q G C S E Q V L T V L K T V S L L D E N N V S S Y L S K N I L A F R D Q N I L L G T T Y R I I A N A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S
S
S

. . . . . . . . . 2810 . . . . . . . . . 2820 . . . . . . . . . 2830 . . . . . . . . . 2840 . . . . . . . . . 2850 . . . . . . . . . 2860 . . . . . . . . . 2870

Sequence S S E P A C L A E I E E D K A R R I V I A G L Y Q R A F Q H L S E A V Q A A E E E A Q P P S W S C G P A A G V I D A Y M T L A D F C D Q Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S T T T G G G
G G G T S
S S

. . . . . . . . . 2880 . . . . . . . . . 2890 . . . . . . . . . 2900 . . . . . . . . . 2910 . . . . . . . . . 2920 . . . . . . . . . 2930 . . . . . . . . . 2940

Sequence R K E E E N A S V I D S A E L Q A Y P A L V V E K M L K A L K L N S N E A R L K F P R L L Q I I E R Y P E E T L S L M T K E I S C W Q F I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T S G G G S
S S
S S
T T T
S
S T

. . . . . . . . . 2950 . . . . . . . . . 2960 . . . . . . . . . 2970 . . . . . . . . . 2980 . . . . . . . . . 2990 . . . . . . . . . 3000 . . . . . . . . . 3010

Sequence W I S H M V A L L D K D Q A V A V Q H S V E E I T D N Y P Q A I V Y P F I I S S E S Y S F K D T S T G H K N K E F V A R I K S K L D Q G G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T S S T T T T
S S T T T T S S S
T

. . . . . . . . . 3020 . . . . . . . . . 3030 . . . . . . . . . 3040 . . . . . . . . . 3050 . . . . . . . . . 3060 . . . . . . . . . 3070 . . . . . . . . . 3080

Sequence I Q D F I N A L D Q L S N P E L L F K D W S N D V R A E L A K T P V N K K N I E K M Y E R M Y A A L G D P K A P G L G A F R R K F I Q T F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T T S S S
S T T T T S
T T S S S
S

. . . . . . . . . 3090 . . . . . . . . . 3100 . . . . . . . . . 3110 . . . . . . . . . 3120 . . . . . . . . . 3130 . . . . . . . . . 3140 . . . . . . . . . 3150

Sequence K E F D K H F G K G G S R M K L S D F N D I T N M L L L K M N K D S K P P G N L K E C S P W M S D F K V E F L R N P G Q Y D G R G K P L P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T S S
S
S S S G G G
S G G G
S S
S

. . . . . . . . . 3160 . . . . . . . . . 3170 . . . . . . . . . 3180 . . . . . . . . . 3190 . . . . . . . . . 3200 . . . . . . . . . 3210 . . . . . . . . . 3220

Sequence Y H V R I A G F D E R V T V M A S L R R P K R I I I R G H D E R E H P F L V K G G E D L R Q D Q R V E Q L F Q V M N G I L A Q D S A C S Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T
S S S
T T
T T T T T T T T
T

. . . . . . . . . 3230 . . . . . . . . . 3240 . . . . . . . . . 3250 . . . . . . . . . 3260 . . . . . . . . . 3270 . . . . . . . . . 3280 . . . . . . . . . 3290

Sequence A L Q L R T Y S V V P M T S R L G L I E W L E N T V T L K D L L L N T M S Q E E K A A Y L S D P R A P P C E Y K D W L T K M S G K H D V G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S T T T S
S S S

. . . . . . . . . 3300 . . . . . . . . . 3310 . . . . . . . . . 3320 . . . . . . . . . 3330 . . . . . . . . . 3340 . . . . . . . . . 3350 . . . . . . . . . 3360

Sequence Y M L M Y K G A N R T E T V T S F R K R E S K V P A D L L K R A F V R M S T S P E A F L A L R S H F A S S H A L I C I S H W I L G I G D R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T S
S S T T T T

. . . . . . . . . 3370 . . . . . . . . . 3380 . . . . . . . . . 3390 . . . . . . . . . 3400 . . . . . . . . . 3410 . . . . . . . . . 3420 . . . . . . . . . 3430

Sequence L N N F M V A M E T G G V I G I D F G H A F G S A T Q F L P V P E L M P F R L T R Q F I N L M L P M K E T G L M Y S I M V H A L R A F R S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T B T T T B
B
S
T T S S S S
S S
S S
S S S S S

. . . . . . . . . 3440 . . . . . . . . . 3450 . . . . . . . . . 3460 . . . . . . . . . 3470 . . . . . . . . . 3480 . . . . . . . . . 3490 . . . . . . . . . 3500

Sequence P G L L T N T M D V F V K E P S F D W K N F E Q K M L K K G G S W I Q E I N V A E K N W Y P R Q K I C Y A K R K L A G A N P A V I T C D E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T T T S
S S
S T T T T T S T T T
S S
S T T T
T

. . . . . . . . . 3510 . . . . . . . . . 3520 . . . . . . . . . 3530 . . . . . . . . . 3540 . . . . . . . . . 3550 . . . . . . . . . 3560 . . .

Sequence L L G H E K A P A F R D Y V A V A R G S K D H N I R A Q E P E S G L S E E T Q V K C L M D Q A T D P N I L G R T W E G W E P W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T T S S S S S
S S
S S
S
S S S

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	R	C	S	L	L	R	L	Q	E	T	L	S	A	A	D	R	C	G	A	A	L	A	G	H	Q	L	I	R	G	L	G	Q	E	C	V	L	S	A	V	L	A	L	Q	T	S	L	V	F	S	R	D	F	G	L	L	V	F	V	R	K	S	L	N	S	I	E	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									T	T	T	T	T	T			T	T	T	T																															T	T	T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	R	E	E	I	L	K	F	L	C	I	F	L	E	K	M	G	Q	K	I	A	P	Y	S	V	E	I	K	N	T	C	T	S	V	Y	T	K	D	R	A	L	D	L	L	I	K	L	L	Q	T	F	R	S	S	R	L	M	D	E	F	K	I	G	E	L	F	S	K	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		S																				T															T	T	S	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	E	L	A	L	K	K	K	I	P	D	T	V	L	E	K	V	Y	E	L	L	G	L	L	G	E	V	H	P	S	E	M	I	N	N	A	E	N	L	F	R	A	F	L	G	E	L	K	T	Q	M	T	S	A	V	R	E	P	K	L	P	V	L	A	G	C	L	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				S	S	S	S																		T	T	T	T	S															T	T	T	T	T	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	S	L	L	C	N	F	T	K	S	M	E	E	D	P	Q	T	S	R	E	I	F	N	F	V	L	K	A	I	R	P	Q	I	D	L	K	R	Y	A	V	P	S	A	G	L	R	L	F	A	L	H	A	S	Q	F	S	T	C	L	L	D	N	Y	V	S	L	F	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S		T	T									T					T	S			S	S	T	G	G	G	T	S	S										T									T	T	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	K	W	C	A	H	T	N	V	E	L	K	K	A	A	L	S	A	L	E	S	F	L	K	Q	V	S	N	M	V	A	K	N	A	E	M	H	K	N	K	L	Q	Y	F	M	E	Q	F	Y	G	I	I	R	N	V	D	S	N	N	K	E	L	S	I	A	I	R	G	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				S																						T	S		S	S																			T	T	T	S			T	T							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	F	A	G	P	C	K	V	I	N	A	K	D	V	D	F	M	Y	V	E	L	I	Q	R	C	K	Q	M	F	L	T	Q	T	D	T	G	D	D	R	V	Y	Q	M	P	S	F	L	Q	S	V	A	S	V	L	L	Y	L	D	T	V	P	E	V	Y	T	P	V	L	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		S	G	G	G	G	T	S			T																G	G	G	S	S	S	S		S			S													T	T			S				S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	V	V	M	Q	I	D	S	F	P	Q	Y	S	P	K	M	Q	L	V	C	C	R	A	I	V	K	V	F	L	A	L	A	A	K	G	P	V	L	R	N	C	I	S	T	V	V	H	Q	G	L	I	R	I	C	S	K	P	V	V	L	K	D	Y	V	D	L	F	R	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S	S																								T																T	T	T	S	S		S						T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	S	S	D	Q	M	A	D	E	A	F	F	S	V	N	S	S	S	E	S	L	N	H	L	L	Y	D	E	F	V	K	S	V	L	K	I	V	E	K	L	D	L	T	L	E	I	Q	T	V	G	E	Q	E	N	G	D	E	A	P	G	V	T	S	D	P	A	A	N	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T	T	T	T	T	T												S	S			S	S	S										S									T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	A	K	P	K	D	F	S	A	F	I	N	L	V	E	F	C	R	E	I	L	P	E	K	Q	A	E	F	F	E	P	W	V	Y	S	F	S	Y	E	L	I	L	Q	S	T	R	L	P	L	I	S	G	F	Y	K	L	L	S	I	T	V	R	N	A	K	K	I	K	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S	S	S	S			T	T							T													S	S								T					T	T		T	T	T						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	E	K	Y	S	C	F	A	L	F	V	K	F	G	K	E	V	A	V	K	M	K	Q	Y	K	D	E	L	L	A	S	C	L	T	F	L	L	S	L	P	H	N	I	I	E	L	D	V	R	A	Y	V	P	A	L	Q	M	A	F	K	L	G	L	S	Y	T	P	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T					S	S	T	T	T	T					T	T	S	S	S	T	T	S	T	T	T	T	S														T	T	T	S	T	T	S	S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	G	L	N	A	L	E	E	W	S	I	Y	I	D	R	H	V	M	Q	P	Y	Y	K	D	I	L	P	C	L	D	G	Y	L	K	T	S	A	L	S	I	S	L	E	E	I	R	I	R	V	V	Q	M	L	G	S	L	G	G	Q	I	N	K	N	L	L	T	V	T	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												S		S			T	T													G	G	G	G																	T	T	S	S	S		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	E	M	M	K	S	Y	V	A	W	D	R	E	M	K	P	V	I	F	L	D	V	F	L	P	R	V	T	E	L	A	L	T	A	S	D	R	Q	T	K	V	A	A	C	E	L	L	H	S	M	V	M	F	M	L	G	K	A	T	Q	M	P	E	G	G	Q	G	A	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	T	T				S					T	T	T	T													G	G	G																					T	T	S	S		S	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	M	Y	Q	L	Y	K	R	T	F	P	V	L	L	R	L	A	C	D	V	D	Q	V	T	R	Q	L	Y	E	P	L	V	M	Q	L	I	H	W	F	T	N	N	K	K	F	E	S	Q	D	T	V	A	L	L	E	A	I	L	D	G	I	V	D	P	V	D	S	T	L	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		S	T										T	T	S													T										S	S	T									T	T	T	T	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	F	C	G	R	C	I	R	E	F	L	K	W	S	I	K	Q	I	T	P	Q	Q	Q	E	K	S	P	V	N	T	K	S	L	F	K	R	L	Y	S	L	A	L	H	P	N	A	F	K	R	L	G	A	S	L	A	F	N	N	I	Y	R	E	F	R	E	E	E	S	L	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										S					T	T	T	T	T	T	S			S													T					T	T	T	T	T															S		S	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Q	F	V	F	E	A	L	V	I	Y	M	E	S	L	A	L	A	H	A	D	E	K	S	L	G	T	I	Q	Q	C	C	D	A	I	D	H	L	C	R	I	I	E	K	K	H	V	S	L	N	K	A	K	K	R	R	L	P	R	G	F	P	P	S	A	S	L	C	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																	T	T		S			S														T	T							T	T					T					T		T	T	T		T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	V	K	W	L	L	A	H	C	G	R	P	Q	K	E	E	G	V	S	F	L	I	N	T	F	E	G	G	G	C	G	Q	P	S	G	I	L	A	Q	P	T	L	L	Y	L	R	G	P	F	S	L	Q	A	T	L	C	W	L	D	L	L	L	A	A	L	E	C	Y	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T	T					T									T	T	T		S			S							T	T		S	T	T			S	S	T	T	T	S													T	T	G	G	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	F	I	G	E	R	T	V	G	A	L	Q	V	L	G	T	E	A	Q	S	S	L	L	K	A	V	A	F	F	L	E	S	I	A	M	H	D	I	I	S	P	Q	E	G	E	R	Y	N	Y	S	K	C	T	V	V	V	R	I	M	E	F	T	T	T	L	L	N	T	S	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	T	T	T	S	S	S	S	S		T	T	S	S	S																																																T	T	S		S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	G	W	K	L	L	K	K	D	L	C	N	T	H	L	M	R	V	L	V	Q	T	L	C	E	P	A	S	I	G	F	N	I	G	D	V	Q	V	M	A	H	L	P	D	V	C	V	N	L	M	K	A	L	K	M	S	P	Y	K	D	I	L	E	T	H	L	R	E	K	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	T	T			S	S	T	T	T	T					T	T	T	S	S					S		S	T	T	T	T	T	T																		T	S	T	T									T	T	T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	A	Q	S	I	E	E	L	C	A	V	N	L	Y	G	P	D	A	Q	V	D	R	S	R	L	A	A	V	V	S	A	C	K	Q	L	H	R	A	G	L	L	H	N	I	L	P	S	Q	S	T	D	L	H	H	S	V	G	T	E	L	L	S	L	V	Y	K	G	I	A	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T					S	S			S	S	S																		G	G	G	G	S	S	S	T	T	T	S	S	T	T	T		T	T	T	T	T									T	T	S	S					T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	D	E	R	Q	C	L	P	S	L	D	L	S	C	K	Q	L	A	S	G	L	L	E	L	A	F	A	F	G	G	L	C	E	G	S	V	I	H	F	S	H	G	E	Y	F	Y	S	L	F	S	E	T	I	N	T	E	L	L	K	N	L	D	L	A	V	L	E	L	M	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T								T					S		S								T	T	G	G	G										T	T	T	T	T						S	S									T	T		T	T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	S	V	D	N	T	K	M	V	S	A	V	L	N	G	M	L	D	Q	S	F	R	E	R	A	D	S	W	W	A	K	D	S	P	L	E	T	K	M	A	V	L	A	L	L	A	K	I	L	Q	I	D	S	S	I	S	L	L	A	D	T	K	L	D	L	H	L	K	G	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																				T	T	T	T	T	S	T	T					S	T	T	T	T	T	T	T	T					T				T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	V	T	L	L	P	F	F	T	S	L	T	G	G	S	L	E	E	L	R	R	V	L	E	Q	L	I	V	A	H	F	P	M	Q	S	R	E	F	P	P	G	T	P	R	F	N	N	Y	V	D	C	M	K	K	F	L	D	A	L	E	L	S	Q	S	P	M	L	L	E	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		S	S	G	G	G			S	S	S	S															S	T	T	T	T	T	S		S							S	S														T	T	T	S			S
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	T	L	E	S	V	Y	E	M	F	R	K	D	D	P	R	L	S	F	T	R	Q	S	K	L	N	E	S	T	F	D	T	Q	I	T	K	K	M	G	Y	Y	K	I	L	D	V	M	Y	S	R	L	P	K	D	D	V	H	A	K	E	S	K	I	N	Q	V	F	H	G	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T					T	T	S	S	S	S		S	S	T	T																	S	S	G	G	G	T		S	G	G	G								S	S	S			T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	I	T	E	G	N	E	L	T	K	T	L	I	K	L	C	Y	D	A	F	T	E	N	M	A	G	E	N	Q	L	L	E	R	R	R	L	Y	H	C	A	A	Y	N	C	A	I	S	V	I	C	C	V	F	N	E	L	K	F	Y	Q	G	F	L	F	S	E	K	P	E	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S			T	T													T	S	S					S															S	S																		T	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	L	L	I	F	E	N	L	I	D	L	K	R	R	Y	N	F	P	V	E	V	E	V	P	M	E	R	K	K	K	Y	I	E	I	R	K	E	A	R	E	A	A	N	G	D	S	D	G	P	S	Y	M	S	S	L	S	Y	L	A	D	S	T	L	S	E	E	M	S	Q	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T																				T	T	T	T									T										S	S	S					S			S	S	S	T	T	T								T
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	F	S	T	G	V	Q	S	Y	S	Y	S	S	Q	D	P	R	P	A	T	G	R	F	R	R	R	E	Q	R	D	P	T	V	H	D	D	V	L	E	L	E	M	D	E	L	N	R	H	E	C	M	A	P	L	T	A	L	V	K	H	M	H	R	S	L	G	S	V	P	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T					T	T		S	S		T	T	T	S	S			S		S	S		S	S								S											T	T												S	S	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	L	P	S	W	M	K	F	L	H	G	K	L	G	N	P	I	V	P	L	N	I	R	L	F	L	A	K	L	V	I	N	T	E	E	V	F	R	P	Y	A	K	H	W	L	S	P	L	L	Q	L	A	A	S	E	N	N	G	G	E	G	I	H	Y	M	V	V	E	I	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	S	T	T	T				S	S	S	T	T											T	T	S	S		G	G	G		S								T	S	T	T	T					S		T	T			T	T
	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960
Sequence	T	I	L	S	W	T	G	L	A	T	P	T	G	V	P	K	D	E	V	L	A	N	R	L	L	N	F	L	M	K	H	V	F	H	P	K	R	A	V	F	R	H	N	L	E	I	I	K	T	L	V	E	C	W	K	D	C	L	S	I	P	Y	R	L	I	F	E	K	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T						S	T	T	T	S	S	S		S														S				T	T	T	T		T																S
	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030
Sequence	G	K	D	P	N	S	K	D	N	S	V	G	I	Q	L	L	G	I	V	M	A	N	D	L	P	P	Y	D	P	Q	C	G	I	Q	S	S	E	Y	F	Q	A	L	V	N	N	M	S	F	V	R	Y	K	E	V	Y	A	A	A	A	E	V	L	G	L	I	L	R	Y	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	T	T	T					T					S	S	S	S	S	S		S	S																				S				S	S	S	S
	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100
Sequence	E	R	K	N	I	L	E	E	S	L	C	E	L	V	A	K	Q	L	K	Q	H	Q	N	T	M	E	D	K	F	I	V	C	L	N	K	V	T	K	S	F	P	P	L	A	D	R	F	M	N	A	V	F	F	L	L	P	K	V	L	K	T	L	C	L	E	V	V	L	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	T	T													S		S	T	T										T	G	G	G	G	T	S				T	T	T	T							T	T	T			T
	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170
Sequence	V	E	G	M	T	E	L	Y	F	Q	L	K	S	K	D	F	V	Q	V	M	R	H	R	D	D	E	R	Q	K	V	C	L	D	I	I	Y	K	M	M	P	K	L	K	P	V	E	L	R	E	L	L	N	P	V	V	E	F	V	S	H	P	S	T	T	C	R	E	Q	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S		S			T	T										T	T				S	G	G	G	T						G	G	G	S	S	S																T	T	S	S	S			T	T
	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240
Sequence	N	I	L	M	W	I	H	D	N	Y	R	D	P	E	S	E	T	D	N	D	S	Q	E	I	F	K	L	A	K	D	V	L	I	Q	G	L	I	D	E	N	P	G	L	Q	L	I	I	R	N	F	W	S	H	E	T	R	L	P	S	N	T	L	D	R	L	L	A	L	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			S	S					T	T															T	S	S			S												T	T	S	S	S	S		S	S	S
	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310
Sequence	L	Y	S	P	K	I	E	V	H	F	L	S	L	A	T	N	F	L	L	E	M	T	S	M	S	P	D	Y	P	N	Y	R	H	G	D	L	P	D	I	Q	I	K	H	S	S	L	I	T	P	L	Q	A	V	A	Q	R	D	P	I	I	A	K	Q	L	F	S	S	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S	S														T	T	S	S	S	S						S	S	S	S	S		S	S	S	T	T					T									S	S	S			T
	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380
Sequence	G	I	L	K	E	M	D	K	F	K	T	L	S	E	K	N	N	I	T	Q	K	L	L	Q	D	F	N	R	F	L	N	T	T	F	S	F	F	P	P	F	V	S	C	I	Q	D	I	S	C	Q	H	A	A	L	L	S	L	D	P	A	A	V	S	A	G	C	L	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T					T	S																		T					S	T	T				S	S	T	T						T	T			S	S						T	T	T	T
	.	.	.	.	.	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450
Sequence	Q	Q	P	V	G	I	R	L	L	E	E	A	L	L	R	L	A	K	R	V	R	G	K	A	R	L	P	P	D	V	L	R	W	V	E	L	L	Y	R	S	I	G	E	Y	D	V	L	R	G	I	F	T	S	E	I	G	T	K	Q	I	T	Q	S	A	L	L	A	E	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S					S	S		T	T	T	T	S						S	S	T	T												T	T	T	S				T											T	T	S
	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520
Sequence	S	D	Y	S	E	A	A	K	Q	Y	D	E	A	L	N	K	Q	D	W	V	D	G	E	P	T	E	A	E	K	D	F	W	E	L	A	S	L	D	C	Y	N	H	L	A	E	W	K	S	L	E	Y	C	S	T	A	S	I	D	S	E	N	P	P	D	L	N	K	I	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T					T	T			S			T	T	T	T					T												S	S	S	S												T	T	S		S	S			S							T
	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.	.	.	.	.	.	.	.	.	2590
Sequence	E	P	F	Y	Q	E	T	Y	L	P	Y	M	I	R	S	K	L	K	L	L	L	Q	G	E	A	D	Q	S	L	L	T	F	I	D	K	A	M	H	G	E	L	Q	K	A	I	L	E	L	H	Y	S	Q	E	L	S	L	L	Y	L	L	Q	D	D	V	D	R	A	K	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	G	G	G							T							S	S				T	T											T	T	T	T	T					T	T									T	T	T	T	T
	.	.	.	.	.	.	.	.	.	2600	.	.	.	.	.	.	.	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.	.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.	.	.	.	.	2660
Sequence	I	Q	N	G	I	Q	S	F	M	Q	N	Y	S	S	I	D	V	L	L	H	Q	S	R	L	T	K	L	Q	S	V	Q	A	L	T	E	I	Q	E	F	I	S	F	I	S	K	Q	G	N	L	S	S	Q	V	P	L	K	R	L	L	N	T	W	T	N	R	Y	P	D	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T											T																T									S													S	S
	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.	.	.	.	.	.	.	2710	.	.	.	.	.	.	.	.	.	2720	.	.	.	.	.	.	.	.	.	2730
Sequence	M	D	P	M	N	I	W	D	D	I	I	T	N	R	C	F	F	L	S	K	I	E	E	K	L	I	S	S	L	I	R	S	C	K	F	S	M	K	M	K	M	I	D	S	A	R	K	Q	N	N	F	S	L	A	M	K	L	L	K	E	L	H	K	E	S	K	T	R	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T																		T	T																				G	G	G	G	S	S		S	T														S	S
	.	.	.	.	.	.	.	.	.	2740	.	.	.	.	.	.	.	.	.	2750	.	.	.	.	.	.	.	.	.	2760	.	.	.	.	.	.	.	.	.	2770	.	.	.	.	.	.	.	.	.	2780	.	.	.	.	.	.	.	.	.	2790	.	.	.	.	.	.	.	.	.	2800
Sequence	W	L	V	S	W	V	Q	S	Y	C	R	L	S	H	C	R	S	R	S	Q	G	C	S	E	Q	V	L	T	V	L	K	T	V	S	L	L	D	E	N	N	V	S	S	Y	L	S	K	N	I	L	A	F	R	D	Q	N	I	L	L	G	T	T	Y	R	I	I	A	N	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	S	S	S																						S																					S				S
	.	.	.	.	.	.	.	.	.	2810	.	.	.	.	.	.	.	.	.	2820	.	.	.	.	.	.	.	.	.	2830	.	.	.	.	.	.	.	.	.	2840	.	.	.	.	.	.	.	.	.	2850	.	.	.	.	.	.	.	.	.	2860	.	.	.	.	.	.	.	.	.	2870
Sequence	S	S	E	P	A	C	L	A	E	I	E	E	D	K	A	R	R	I	V	I	A	G	L	Y	Q	R	A	F	Q	H	L	S	E	A	V	Q	A	A	E	E	E	A	Q	P	P	S	W	S	C	G	P	A	A	G	V	I	D	A	Y	M	T	L	A	D	F	C	D	Q	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							T									T	T	S	T	T	T														G	G	G		G	G	G	T	S				S	S
	.	.	.	.	.	.	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.	.	.	.	2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.	.	.	.	.	.	2930	.	.	.	.	.	.	.	.	.	2940
Sequence	R	K	E	E	E	N	A	S	V	I	D	S	A	E	L	Q	A	Y	P	A	L	V	V	E	K	M	L	K	A	L	K	L	N	S	N	E	A	R	L	K	F	P	R	L	L	Q	I	I	E	R	Y	P	E	E	T	L	S	L	M	T	K	E	I	S	C	W	Q	F	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S				S							T	T	S	G	G	G					S		S	S		S	S			T													T	T												S								S	T
	.	.	.	.	.	.	.	.	.	2950	.	.	.	.	.	.	.	.	.	2960	.	.	.	.	.	.	.	.	.	2970	.	.	.	.	.	.	.	.	.	2980	.	.	.	.	.	.	.	.	.	2990	.	.	.	.	.	.	.	.	.	3000	.	.	.	.	.	.	.	.	.	3010
Sequence	W	I	S	H	M	V	A	L	L	D	K	D	Q	A	V	A	V	Q	H	S	V	E	E	I	T	D	N	Y	P	Q	A	I	V	Y	P	F	I	I	S	S	E	S	Y	S	F	K	D	T	S	T	G	H	K	N	K	E	F	V	A	R	I	K	S	K	L	D	Q	G	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	T	T												T	T	S	S	T	T	T										T						S	S	T	T													T	T	S	S	S		T
	.	.	.	.	.	.	.	.	.	3020	.	.	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080
Sequence	I	Q	D	F	I	N	A	L	D	Q	L	S	N	P	E	L	L	F	K	D	W	S	N	D	V	R	A	E	L	A	K	T	P	V	N	K	K	N	I	E	K	M	Y	E	R	M	Y	A	A	L	G	D	P	K	A	P	G	L	G	A	F	R	R	K	F	I	Q	T	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S												S	S	T	T	S	S	S				S											T	T	T	T	S		T	T	S					S	S			S
	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150
Sequence	K	E	F	D	K	H	F	G	K	G	G	S	R	M	K	L	S	D	F	N	D	I	T	N	M	L	L	L	K	M	N	K	D	S	K	P	P	G	N	L	K	E	C	S	P	W	M	S	D	F	K	V	E	F	L	R	N	P	G	Q	Y	D	G	R	G	K	P	L	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T						S	T																	S	S				S				S	S	S	G	G	G				S	G	G	G									S	S				S
	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220
Sequence	Y	H	V	R	I	A	G	F	D	E	R	V	T	V	M	A	S	L	R	R	P	K	R	I	I	I	R	G	H	D	E	R	E	H	P	F	L	V	K	G	G	E	D	L	R	Q	D	Q	R	V	E	Q	L	F	Q	V	M	N	G	I	L	A	Q	D	S	A	C	S	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S							S	T	T										S	S	S									T	T			T	T													T	T	T	T	T	T							T
	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290
Sequence	A	L	Q	L	R	T	Y	S	V	V	P	M	T	S	R	L	G	L	I	E	W	L	E	N	T	V	T	L	K	D	L	L	L	N	T	M	S	Q	E	E	K	A	A	Y	L	S	D	P	R	A	P	P	C	E	Y	K	D	W	L	T	K	M	S	G	K	H	D	V	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T								S	S										T	T	T																											S			S	S	S
	.	.	.	.	.	.	.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360
Sequence	Y	M	L	M	Y	K	G	A	N	R	T	E	T	V	T	S	F	R	K	R	E	S	K	V	P	A	D	L	L	K	R	A	F	V	R	M	S	T	S	P	E	A	F	L	A	L	R	S	H	F	A	S	S	H	A	L	I	C	I	S	H	W	I	L	G	I	G	D	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																				T													S		S	S	T	T	T																							T
	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.	.	.	3390	.	.	.	.	.	.	.	.	.	3400	.	.	.	.	.	.	.	.	.	3410	.	.	.	.	.	.	.	.	.	3420	.	.	.	.	.	.	.	.	.	3430
Sequence	L	N	N	F	M	V	A	M	E	T	G	G	V	I	G	I	D	F	G	H	A	F	G	S	A	T	Q	F	L	P	V	P	E	L	M	P	F	R	L	T	R	Q	F	I	N	L	M	L	P	M	K	E	T	G	L	M	Y	S	I	M	V	H	A	L	R	A	F	R	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	B				T	T	T	B				B				S			T	T					S	S	S	S					S	S											S	S			S	S	S	S														S
	.	.	.	.	.	.	.	.	.	3440	.	.	.	.	.	.	.	.	.	3450	.	.	.	.	.	.	.	.	.	3460	.	.	.	.	.	.	.	.	.	3470	.	.	.	.	.	.	.	.	.	3480	.	.	.	.	.	.	.	.	.	3490	.	.	.	.	.	.	.	.	.	3500
Sequence	P	G	L	L	T	N	T	M	D	V	F	V	K	E	P	S	F	D	W	K	N	F	E	Q	K	M	L	K	K	G	G	S	W	I	Q	E	I	N	V	A	E	K	N	W	Y	P	R	Q	K	I	C	Y	A	K	R	K	L	A	G	A	N	P	A	V	I	T	C	D	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S		T	T	T	T	T	S							S	S		S	T	T	T	T	T	S	T	T	T		S	S				S											T	T	T				T
	.	.	.	.	.	.	.	.	.	3510	.	.	.	.	.	.	.	.	.	3520	.	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.	.	.	.	.	.	.	3560	.	.	.
Sequence	L	L	G	H	E	K	A	P	A	F	R	D	Y	V	A	V	A	R	G	S	K	D	H	N	I	R	A	Q	E	P	E	S	G	L	S	E	E	T	Q	V	K	C	L	M	D	Q	A	T	D	P	N	I	L	G	R	T	W	E	G	W	E	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T										T					T	T	T	S	S	S	S	S		S	S			S	S																		S			S	S	S