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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vz0D_

Fold library idPDB HeaderMoleculeTitle
c5vz0D_2.00PDB header: ligaseChain: D: PDB Molecule: pyruvate carboxylase;


Added to library: Sat Aug 19 08:50:55 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPRGSHMKKLLVANRGEIAVRVFRACNELGLSTVAVYAREDEYSVHRFKADESYLIGQGKKPIDAYLDID
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Known secondary structure (DSSP)

TT


SS

TT

GGGTT
SS
STTS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DIIRVALESGADAIHPGYGLLSENLEFATKVRAAGLVFVGPELHHLDIFGDKIKAKAAADEAKVPGIPGT
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Known secondary structure (DSSP) T



SSTTTT
TT
SS

STT

B

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGAVDIDGALEFAKTYGYPVMIKAALMRVARNDAEMHDGYARAKSEAIGAFGSGEIYVEKYIENPKHIEV
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Known secondary structure (DSSP) SS



SS


SSTS




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QILGDRHGNIIHLHERDCSVQRRNQKVIEIAPAVGLSPDFRNEICEAAVKLCKNVGYVNAGTVEFLVKDD
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Known secondary structure (DSSP)
TTS
TTS
TTS
T

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KFYFIEVNPRVQVEHTITELITGVDIVQAQILIAQGKDLHREIGLPAQSEIPLLGSAIQCRITTEDPQNG
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Known secondary structure (DSSP)
S

TT


TT

TTTTS



GGG



SSGGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLPDTGKIDTYRSPGGFGIRLDVGNAYAGYEVTPYFDSLLVKVCTFANEFSDSVRKMDRVLHEFRIRGVK
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Known secondary structure (DSSP) T






STT
S

TT

SSS

SS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TNIPFLINVIANENFTSGQATTTFIDNTPSLFNFPRLRDRGTKTLHYLSMITVNGFPGIENTEKRHFEEP
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Known secondary structure (DSSP)
SSTT


TTTGGG
GGGG








TTS










 .........500.........510.........520.........530.........540.........550.........560
Sequence RQPLLNLEKKKTAKNILDEQGADAVVDYVKNTKEVLLTDTTLRDAHQSLLATRLRLQDMKGIAQAIDQGL
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T

SB
TTTSTT


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence PELFSAEMWGGATFDVAYRFLNESPWYRLRKLRKLMPNTMFQMLFRGSNAVGYQNYPDNVIEEFIRVAAH
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Known secondary structure (DSSP) TT
STTS
S

TTSTTTBT
SS


 .........640.........650.........660.........670.........680.........690.........700
Sequence EGIDVFRIFDSLNWLPQMEKSIQAVRDNGKIAEATICYTGDILDPSRPKYNIQYYKDLAKELEATGAHIL
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Known secondary structure (DSSP) T


TT

TTT


S
TT
TT
GGG
TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence AVKDMAGLLKPQAAYRLISELKDTVDLPIHLHTHDTSGNGIITYSAATQAGVDIIDVATASLAGGTSQPS
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Known secondary structure (DSSP)
TT





S



TTS
TT
SB
GGG
STTS

B
 .........780.........790.........800.........810.........820.........830.........840
Sequence MQSIYYALEHGPRHASINVKNAEQIDHYWEDVRKYYAPFEAGITSPQTEVYMHEMPGGQYTNLKSQAAAV
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Known secondary structure (DSSP) TTSSS
B
S
TGGG

S




TT


TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence GLGHRFDEIKQMYRKVNMMFGDIIKVTPSSKVVGDMALFMIQNDLTEEDVYARGNELNFPESVVSFFRGD
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Known secondary structure (DSSP) T
GGGTTS


STTTT

GGG



TTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LGQPVGGFPEKLQKIIVKDKAVITDRPGLHAEKVDFETVKADLEQKIGYEPGDHEVISYIMYPQVFLDYQ
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Known secondary structure (DSSP) T


TT


TTS



S
GGGGS



TS


S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KMQREFGAVTLLDTPTFLHGMRLNEKIEVQIEKGKTLSIRLDEIGEPDLAGNRVLFFNLNGQRREVVIND
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Known secondary structure (DSSP)

GGGS



TT
TT



TT
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QSVQAQVVAKRKAETGNPNQIGATMPGSVLEILVKAGDKVQKGQALMVTEAMKMETTIEAPFDGEIVDLH
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Known secondary structure (DSSP) T





B

TT
TT
SSS


TT

TT
TT
SSS
 .........1130.......
Sequence VVKGEAIQTQDLLIEIN
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Known secondary structure (DSSP)

TT

TTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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