Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vrhA_

Fold library idPDB HeaderMoleculeTitle
c5vrhA_2.14PDB header: transferaseChain: A: PDB Molecule: apolipoprotein n-acyltransferase;


Added to library: Sat Jul 15 08:51:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIGFCWGFGLFGSGIN
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)

GGGSGGGGSTTT

TTTT

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence WVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) T




S
STTTGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQW
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) G





TTGGGTTSTTGGG
T
TTGGGGG


 .........220.........230.........240.........250.........260.........270.........280
Sequence FTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKA
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

GGG




T
GGGGGGTTT
S

TT
GGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESSFSR
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TT

TTS
TTS


TT
S


S

BTTTB
S






 .........360.........370.........380.........390.........400.........410.........420
Sequence GPYIQPPLSANGIELTAAISYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

SS


TTGGGGG


TT


GGGG
SSST
 .........430.........440.........450.........460.........470.........480.........490
Sequence RPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

SSS


TTS


SS






TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D