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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5voxb_

Fold library idPDB HeaderMoleculeTitle
c5voxb_6.80PDB header: hydrolaseChain: B: PDB Molecule: v-type proton atpase subunit b;


Added to library: Sat Jun 24 09:29:39 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVERQYRYFYSLLKKHDIKL
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Known secondary structure (DSSP)

TTSTTT

SSS
SSS


TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence YEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSGDEFNI
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Known secondary structure (DSSP)






SSSS
SS





 .........150.........160.........170.........180.........190.........200.........210
Sequence AAAIGASVNYVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQKNAFIVFSHGDLIIKRIRKIAESLDA
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Known secondary structure (DSSP) SSSS
SSS
S

S
S









SS
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NLYDVDSSNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESELYAIAKELDSWFQDVTREKAIFEILNKSNY
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Known secondary structure (DSSP)


SS

S

SSSSSSSTT
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DTNRKILIAEGWIPRDELATLQARLGEMIARLGIAQYREINAGLPTIVTFPFMFAIMFGHGFLMTLAALS
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Known secondary structure (DSSP) STTT


SSSTTGGGSS

SS




-


SSSSSSTTTT
-
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNGTENALLFSNSYKMKLSILMGFIHMTYS
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Known secondary structure (DSSP) T

SST
-


SSTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YFFSLANHLDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDGKPAPGLLNMLINMFLSPGTIDDELY
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Known secondary structure (DSSP)

-



SSSSSSSTT

SSSS
SS
SSTTT
SS


SSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence PHQAKVQVFLLLMALVCIPWLLLVKPLHFKFDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQLSS
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Known secondary structure (DSSP) S

SS
-
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKPYEPFAFEYK
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Known secondary structure (DSSP) SS
SS
TT
-

 ....
Sequence DMEV
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)
-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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