Fold library entry viewer: c5vodA_

Added to library: Sat Jul 8 08:18:20 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	L	N	T	Y	G	R	P	I	R	F	L	R	E	N	T	T	Q	C	T	Y	N	S	S	L	R	N	S	T	V	V	R	E	N	A	I	S	F	N	F	F	Q	S	Y	N	Q	Y	Y	V	F	H	M	P	R	C	L	F	A	G	P	L	A	E	Q	F	L	N	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S									S	S						S					S	S					T	T	S									T	T									G	G	G	G	T	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	T	E	T	L	E	R	Y	Q	Q	R	L	N	T	Y	A	L	V	S	K	D	L	A	S	Y	R	S	F	S	Q	Q	L	K	A	Q	D	S	L	G	E	Q	P	T	T	V	P	P	P	I	D	L	S	I	P	H	V	W	M	P	P	Q	T	T	P	H	G	W	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S										T	T	B			T	T	T	T	S	S														T	T	T	T		S	S	S	S				T	T					B							T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	H	T	T	S	G	L	H	R	P	H	F	N	Q	T	C	I	L	F	D	G	H	D	L	L	F	S	T	V	T	P	C	L	H	Q	G	F	Y	L	I	D	E	L	R	Y	V	K	I	T	L	T	E	D	F	F	V	V	T	V	S	I	D	D	D	T	P	M	L	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																	S	S	S		S	S																S	S	T	T									S	S								S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	G	H	L	P	R	V	L	F	K	A	P	Y	Q	R	D	N	F	I	L	R	Q	T	E	K	H	E	L	L	V	L	V	K	K	D	Q	L	N	R	H	S	Y	L	K	D	P	D	F	L	D	A	A	L	D	F	N	Y	L	D	L	S	A	L	L	R	N	S	F	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					T	T			G	G	G	G						S	S								B	T	T	G	G	G	T	T	G	G	G	S		T	T	T	T					S	S		T	T	S								T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	A	V	D	V	L	K	S	G	R	C	Q	M	L	D	R	R	T	V	E	M	A	F	A	Y	A	L	A	L	F	A	A	A	R	Q	E	E	A	G	A	Q	V	S	V	P	R	A	L	D	R	Q	A	A	L	L	Q	I	Q	E	F	M	I	T	C	L	S	Q	T	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T			S	S		S																			S	G	G	G	G	G																												S	S	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	T	T	L	L	L	Y	P	T	A	V	D	L	A	K	R	A	L	W	T	P	N	Q	I	T	D	I	T	S	L	V	R	L	V	Y	I	L	S	K	Q	N	Q	Q	H	L	I	P	Q	W	A	L	R	Q	I	A	D	F	A	L	K	L	H	K	T	H	L	A	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																		S	S	S	S			B														T	T		G	G	G																				S	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	A	F	A	R	Q	E	L	Y	L	M	G	S	L	V	H	S	M	L	V	H	T	T	E	R	R	E	I	F	I	V	E	T	G	L	C	S	L	A	E	L	S	H	F	T	Q	L	L	A	H	P	H	H	E	Y	L	S	D	L	Y	T	P	C	S	S	S	G	R	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T			S															T												T	T	S	S					S	G	G	G	G			G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	S	L	E	R	L	T	R	L	F	P	A	T	V	P	A	A	L	S	I	L	S	T	M	Q	P	S	T	L	E	T	F	P	D	L	F	C	L	P	L	G	E	S	F	S	A	L	T	V	S	E	H	V	S	Y	I	V	T	N	Q	Y	L	I	K	G	I	S	Y	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T				S											S	S		S			T	T		T	T	T	S	S	S		T	T	S								S	S	S							S	S			B	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	T	T	V	V	S	L	I	I	T	Q	T	D	S	Q	T	K	C	E	L	T	R	N	M	H	T	T	H	S	I	T	V	A	L	N	I	S	L	E	N	C	A	F	C	Q	S	A	L	L	E	Y	D	D	T	Q	G	V	I	N	I	M	Y	M	H	D	S	D	D	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												T	T	S				B			S				B							S	S				G	G	G	T	T	S	S								S	S	S										S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Sequence	F	A	L	D	P	Y	N	E	V	V	V	S	S	P	R	T	H	Y	L	M	L	L	K	N	G	T	V	L	E	V	T	D	V	V	V	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	G	G	G	S	S				T	T								T	T	S											T

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PDB structure

FASTA sequence

Hidden Markov model

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