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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vl1D_

Fold library idPDB HeaderMoleculeTitle
c5vl1D_2.70PDB header: ligaseChain: D: PDB Molecule: lysine--trna ligase;


Added to library: Sat May 13 08:22:07 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIPEQFRIRRDKRARLLAEGYDPYPVAIERTHTLAEIRATYADLPTDSATEDIVGVAGRVVFARNTGKLC
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TT

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SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FATLQDGDGTQLQAMISLDEVGRESLDRWKADVDIGDVVYVHGTVISSRRGELSVLADSWRMAAKALRPL
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TT

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 .........150.........160.........170.........180.........190.........200.........210
Sequence PVKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPMLQTLAGGAAARPFVTH
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S
T
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 .........220.........230.........240.........250.........260.........270.........280
Sequence SNALDIDLYLRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDSTHSPEFSMLETYQTYGTYDDSALITRE
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Known secondary structure (DSSP) TTTT
S
ST
S



S

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ST

 .........290.........300.........310.........320.........330.........340.........350
Sequence LIQEVADEAIGTRQLSMPDGSVYDIDGEWATMEMYSSLSEALGEQITPETTVARLRDIASGLDVESVFGH
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Known secondary structure (DSSP) TS
S
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 .........360.........370.........380.........390.........400.........410.........420
Sequence GKLVEELWEHAVGNKLTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYSELNDPVVQRD
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Known secondary structure (DSSP) TTTT

S
GGG
TTB
B
SSSTTTTB


 .........430.........440.........450.........460.........470.........480....
Sequence RFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTGLSIRETVLFPIVRK
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Known secondary structure (DSSP) TT
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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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