PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5vkqC_

Fold library id	PDB Header	Molecule	Title
c5vkqC_	3.55	PDB header: membrane protein	Chain: C: PDB Molecule: no mechanoreceptor potential c isoform l;

Links to external resources
Added to library: Sat Jul 1 12:06:36 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N T G M T P L M Y A T K D N K T A I M D R M I E L G A D V G A R N N D N Y N V L H I A A M Y S R E D V V K L L L T K R G V D P F S T G G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T
T T S T T
T T S
T T T T
S T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R S Q T A V H L V S S R Q T G T A T N I L R A L L A A A G K D I R L K A D G R G K I P L L L A V E S G N Q S M C R E L L A A Q T A E Q L K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S T T T T S S S
S
T T S
T T
T T T T T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T T A N G D T A L H L A A R R R D V D M V R I L V D Y G T N V D T Q N G E G Q T P L H I A A A E G D E A L L K Y F Y G V R A S A S I A D N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
S T T T T
T T
S S
T T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D R T P M H L A A E N G H A H V I E I L A D K F K A S I F E R T K D G S T L M H I A S L N G H A E C A T M L F K K G V Y L H M P N K D G A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S T T
T T
S S
T T
S S
S
T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence S I H T A A A Y G H T G I I N T L L Q K G E K V D V T T N D N Y T A L H I A V E S A K P A V V E T L L G F G A D V H V R G G K L R E T P L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T
S T
T
T T
S S S
T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence I A A R V K D G D R C A L M L L K S G A S P N L T T D D C L T P V H V A A R H G N L A T L M Q L L E D E G D P L Y K S N T G E T P L H M A C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T S
T T
T T S
T
T T
T T
T T S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence R A C H P D I V R H L I E T V K E K H G P D K A T T Y I N S V N E D G A T A L H Y T C Q I T K E E V K I P E S D K Q I V R M L L E N G A D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T
G G G
T
S S S
S T T T
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence T L Q T K T A L E T A F H Y C A V A G N N D V L M E M I S H M N P T D I Q K A M N R Q S S V G W T P L L I A C H R G H M E L V N N L L A N H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
S G G G T T T S
S S T
S S
T
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence A R V D V F D T E G R S A L H L A A E R G Y L H V C D A L L T N K A F I N S K S R V G R T A L H L A A M N G F T H L V K F L I K D H N A V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
T T
S S
S S
T
S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence D I L T L R K Q T P L H L A A A S G Q M E V C Q L L L E L G A N I D A T D D L G Q K P I H V A A Q N N Y S E V A K L F L Q Q H P S L V N A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T
T T
T T
T T
S
S S
G G G

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence S K D G N T C A H I A A M Q G S V K V I E E L M K F D R S G V I S A R N K L T D A T P L Q L A A E G G H A D V V K A L V R A G A S C T E E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
S
T T T
T
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence K A G F T A V H L A A Q N G H G Q V L D V L K S T N S L R I N S K K L G L T P L H V A A Y Y G Q A D T V R E L L T S V P A T V K S E T P T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T
S
S S S
S
S
S
S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence Q S L F G D L G T E S G M T P L H L A A F S G N E N V V R L L L N S A G V Q V D A A T I E N G Y N P L H L A C F G G H M S V V G L L L S R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S T T
S
S S
T T S S
S S
S S
T S
T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence A E L L Q S Q D R N G R T G L H I A A M H G H I Q M V E I L L G Q G A E I N A T D R N G W T P L H C A A K A G H L E V V K L L C E A G A S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T S
T T
S S
S S
T
T S
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence K S E T N Y G C A A I W F A A S E G H N E V L R Y L M N K E H D T Y G L M E D K R F V Y N L M V V S K N H N N K P I Q E F V L V S P A P V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
S
T T
T T T S S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence T A A K L S N I Y I V L S T K E K E R A K D L V A A G K Q C E A M A T E L L A L A A G S D S A G K I L Q A T D K R N V E F L D V L I E N E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T
B
S S S S B T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence K E V I A H T V V Q R Y L Q E L W H G S L T W A S W K I L L L L V A F I V C P P V W I G F T F P M G H K F N K V P I I K F M S Y L T S H I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T S
S S
S T T
S S T T S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence L M I H L S I V G I T P I Y P V L R L S L V P Y W Y E V G L L I W L S G L L L F E L T N P S D K S G L G S I K V L V L L L G M A G V G V H V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
S S S
S
S G G G

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence S A F L F V S K E Y W P T L V Y C R N Q C F A L A F L L A C V Q I L D F L S F H H L F G P W A I I I G D L L K D L A R F L A V L A I F V F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T
S T T T T S T T T T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence F S M H I V A L N Q S F A N F S P E D L R S F E K K N R N R G Y F S D V R M H P I N S F E L L F F A V F G Q T T T E Q T Q V D K I K N V A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T S T T T T T S
S S
S
S
G G G T T T
S T T T
T T
S S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence P T Q P Y W V E Y L F K I V F G I Y M L V S V V V L I Q L L I A M M S D T Y Q R I Q A Q S D I E W K F G L S K L I R N M H R T T T A P S P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S T T
T T T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . .

Sequence N L V T T W F M W R I E N V A D W E A I A K K Y R A L V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
G G G S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	T	G	M	T	P	L	M	Y	A	T	K	D	N	K	T	A	I	M	D	R	M	I	E	L	G	A	D	V	G	A	R	N	N	D	N	Y	N	V	L	H	I	A	A	M	Y	S	R	E	D	V	V	K	L	L	L	T	K	R	G	V	D	P	F	S	T	G	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S									T	T	T		T	T													S	T	T				T	T	S								T	T	T	T		S								T	T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	Q	T	A	V	H	L	V	S	S	R	Q	T	G	T	A	T	N	I	L	R	A	L	L	A	A	A	G	K	D	I	R	L	K	A	D	G	R	G	K	I	P	L	L	L	A	V	E	S	G	N	Q	S	M	C	R	E	L	L	A	A	Q	T	A	E	Q	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											T	T		S									T	T	T	T	S	S	S		S			T	T	S										T	T		T	T	T	T	T	T										S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	T	A	N	G	D	T	A	L	H	L	A	A	R	R	R	D	V	D	M	V	R	I	L	V	D	Y	G	T	N	V	D	T	Q	N	G	E	G	Q	T	P	L	H	I	A	A	A	E	G	D	E	A	L	L	K	Y	F	Y	G	V	R	A	S	A	S	I	A	D	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S										T	T		S							T	T	T	T			T	T				S	S				T	T							T											T	T								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	R	T	P	M	H	L	A	A	E	N	G	H	A	H	V	I	E	I	L	A	D	K	F	K	A	S	I	F	E	R	T	K	D	G	S	T	L	M	H	I	A	S	L	N	G	H	A	E	C	A	T	M	L	F	K	K	G	V	Y	L	H	M	P	N	K	D	G	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		S									T	T			T	T					S	S				T								T											S	S			S					T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	I	H	T	A	A	A	Y	G	H	T	G	I	I	N	T	L	L	Q	K	G	E	K	V	D	V	T	T	N	D	N	Y	T	A	L	H	I	A	V	E	S	A	K	P	A	V	V	E	T	L	L	G	F	G	A	D	V	H	V	R	G	G	K	L	R	E	T	P	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T															T	T				T	T				S								T												T			T	T				S	S	S				T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	A	A	R	V	K	D	G	D	R	C	A	L	M	L	L	K	S	G	A	S	P	N	L	T	T	D	D	C	L	T	P	V	H	V	A	A	R	H	G	N	L	A	T	L	M	Q	L	L	E	D	E	G	D	P	L	Y	K	S	N	T	G	E	T	P	L	H	M	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T	T										S				T	T				T	T	S											T											T	T			T	T				T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	A	C	H	P	D	I	V	R	H	L	I	E	T	V	K	E	K	H	G	P	D	K	A	T	T	Y	I	N	S	V	N	E	D	G	A	T	A	L	H	Y	T	C	Q	I	T	K	E	E	V	K	I	P	E	S	D	K	Q	I	V	R	M	L	L	E	N	G	A	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																S										T				G	G	G									T			S	S	S			S	T	T												T				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	L	Q	T	K	T	A	L	E	T	A	F	H	Y	C	A	V	A	G	N	N	D	V	L	M	E	M	I	S	H	M	N	P	T	D	I	Q	K	A	M	N	R	Q	S	S	V	G	W	T	P	L	L	I	A	C	H	R	G	H	M	E	L	V	N	N	L	L	A	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S	S	S												S	G	G	G	T						T	T	S		S	S							T				S	S												T											T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	V	D	V	F	D	T	E	G	R	S	A	L	H	L	A	A	E	R	G	Y	L	H	V	C	D	A	L	L	T	N	K	A	F	I	N	S	K	S	R	V	G	R	T	A	L	H	L	A	A	M	N	G	F	T	H	L	V	K	F	L	I	K	D	H	N	A	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T				T	T												T											T	T			S	S				S	S												T																S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	I	L	T	L	R	K	Q	T	P	L	H	L	A	A	A	S	G	Q	M	E	V	C	Q	L	L	L	E	L	G	A	N	I	D	A	T	D	D	L	G	Q	K	P	I	H	V	A	A	Q	N	N	Y	S	E	V	A	K	L	F	L	Q	Q	H	P	S	L	V	N	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T												T															T	T				T	T											T	T											S		S	S		G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	K	D	G	N	T	C	A	H	I	A	A	M	Q	G	S	V	K	V	I	E	E	L	M	K	F	D	R	S	G	V	I	S	A	R	N	K	L	T	D	A	T	P	L	Q	L	A	A	E	G	G	H	A	D	V	V	K	A	L	V	R	A	G	A	S	C	T	E	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S											T																		S				T	T	T												T															T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	A	G	F	T	A	V	H	L	A	A	Q	N	G	H	G	Q	V	L	D	V	L	K	S	T	N	S	L	R	I	N	S	K	K	L	G	L	T	P	L	H	V	A	A	Y	Y	G	Q	A	D	T	V	R	E	L	L	T	S	V	P	A	T	V	K	S	E	T	P	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												T														S					S	S	S											S													S		S									S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	S	L	F	G	D	L	G	T	E	S	G	M	T	P	L	H	L	A	A	F	S	G	N	E	N	V	V	R	L	L	L	N	S	A	G	V	Q	V	D	A	A	T	I	E	N	G	Y	N	P	L	H	L	A	C	F	G	G	H	M	S	V	V	G	L	L	L	S	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	T	T		S			S	S																				T	T	S	S					S	S				S	S										T	S													T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	E	L	L	Q	S	Q	D	R	N	G	R	T	G	L	H	I	A	A	M	H	G	H	I	Q	M	V	E	I	L	L	G	Q	G	A	E	I	N	A	T	D	R	N	G	W	T	P	L	H	C	A	A	K	A	G	H	L	E	V	V	K	L	L	C	E	A	G	A	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T				T	T	S										T	T															S	S				S	S												T											T	S			S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	K	S	E	T	N	Y	G	C	A	A	I	W	F	A	A	S	E	G	H	N	E	V	L	R	Y	L	M	N	K	E	H	D	T	Y	G	L	M	E	D	K	R	F	V	Y	N	L	M	V	V	S	K	N	H	N	N	K	P	I	Q	E	F	V	L	V	S	P	A	P	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S										S												S								T	T															T	T	T										S	S	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	T	A	A	K	L	S	N	I	Y	I	V	L	S	T	K	E	K	E	R	A	K	D	L	V	A	A	G	K	Q	C	E	A	M	A	T	E	L	L	A	L	A	A	G	S	D	S	A	G	K	I	L	Q	A	T	D	K	R	N	V	E	F	L	D	V	L	I	E	N	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S																									T	T	T	T						T		B		S	S	S	S	B								T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	K	E	V	I	A	H	T	V	V	Q	R	Y	L	Q	E	L	W	H	G	S	L	T	W	A	S	W	K	I	L	L	L	L	V	A	F	I	V	C	P	P	V	W	I	G	F	T	F	P	M	G	H	K	F	N	K	V	P	I	I	K	F	M	S	Y	L	T	S	H	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S													T	S					S	S																						S	T	T		S	S	T	T	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	L	M	I	H	L	S	I	V	G	I	T	P	I	Y	P	V	L	R	L	S	L	V	P	Y	W	Y	E	V	G	L	L	I	W	L	S	G	L	L	L	F	E	L	T	N	P	S	D	K	S	G	L	G	S	I	K	V	L	V	L	L	L	G	M	A	G	V	G	V	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S		S	S				S	S	S																								S					S	G	G	G
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	S	A	F	L	F	V	S	K	E	Y	W	P	T	L	V	Y	C	R	N	Q	C	F	A	L	A	F	L	L	A	C	V	Q	I	L	D	F	L	S	F	H	H	L	F	G	P	W	A	I	I	I	G	D	L	L	K	D	L	A	R	F	L	A	V	L	A	I	F	V	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S			T	T	T		S																								T	T	T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	F	S	M	H	I	V	A	L	N	Q	S	F	A	N	F	S	P	E	D	L	R	S	F	E	K	K	N	R	N	R	G	Y	F	S	D	V	R	M	H	P	I	N	S	F	E	L	L	F	F	A	V	F	G	Q	T	T	T	E	Q	T	Q	V	D	K	I	K	N	V	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T														T	S	T	T	T	T	T	S			S	S		S			S										G	G	G	T	T	T				S	T	T	T						T	T		S	S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	P	T	Q	P	Y	W	V	E	Y	L	F	K	I	V	F	G	I	Y	M	L	V	S	V	V	V	L	I	Q	L	L	I	A	M	M	S	D	T	Y	Q	R	I	Q	A	Q	S	D	I	E	W	K	F	G	L	S	K	L	I	R	N	M	H	R	T	T	T	A	P	S	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	S																		T																																					T						T	T	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.
Sequence	N	L	V	T	T	W	F	M	W	R	I	E	N	V	A	D	W	E	A	I	A	K	K	Y	R	A	L	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					T	T			G	G	G	S	S