Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vheA_

Fold library idPDB HeaderMoleculeTitle
c5vheA_3.79PDB header: hydrolaseChain: A: PDB Molecule: deah (asp-glu-ala-his) box polypeptide 36;


Added to library: Sat Jun 16 08:43:49 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQTKTEAYIDRDSEYLLQENEP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

S








TT

TTTTTS




 .........80.........90.........100.........110.........120.........130.........140
Sequence DATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
S
TSTT
S

SSSSSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTT

SS
SSTT

SSSSSSTT


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHI
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTT
TT
TT



TTS


TT



SSSTSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence PGFTFPVVEYLLEDIIEKIRYVPEQKGHVNRQEKYYYEAIYKERWPGYLRELRQRYSASTVDVVEMMDDE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)







T







S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFK
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S

S
S

SSTSTTTSSTT
SSS
S


 .........430.........440.........450.........460.........470.........480.........490
Sequence RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S

SS

TS





S
SSS



TTTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence GHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELN
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

S
TTGGGS

SS


GGGSS

TT


SSS


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKEL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
S
SSSS

SSTSSS
TT
SS






TT

 .........640.........650.........660.........670.........680.........690.........700
Sequence AAATASDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQD
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTS
B
T

TSSSSS
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence PESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIY
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) GGG
SS
S
SS



SSS


SSS

TTSSTTS



SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence HLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQ
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S
SSSSS

S



SSSS
TTT

 .........850.........860.........870.
Sequence EKIESPHPVDWKDTKSRDCAVLSAIIDLIKT
Predicted secondary structure













SS confidence






























Known secondary structure (DSSP) S




TT
SSS

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D