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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vfzA_

Fold library idPDB HeaderMoleculeTitle
c5vfzA_1.85PDB header: dna binding proteinChain: A: PDB Molecule: gp33;


Added to library: Sat Apr 21 09:09:30 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFKGQYPMVNRWRTWQFAQSLSARTVEERVATVRRMAAWCGVEPEFAQVEQIVSWLAEGGNWSARTRWTY
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Known secondary structure (DSSP)

TT

TT

TS
GGG

SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence YGALSAWFLWLQQQGHRHDNPMVMIGRPKRPKSVPRPVSNLDVQRLLAVRAHKRTKAMILLAAFQGLRVH
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Known secondary structure (DSSP) TTS
S

GGGGS













S





 .........150.........160.........170.........180.........190.........200.........210
Sequence EIAQIKGEHLDLIERTMTVTGKGNVTATLPLHHRVVEIAYQMPRRGHWFPGPDRGHQRRESVSGTIKEAM
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Known secondary structure (DSSP) T
BGGGTTTT
STT


TTS
SSSBSSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence IRAGVVGSAHCLRHWFGTALLEAGVDLRTVQELMRHQSLTSTEIATRVTDQRRAEGIERLDPFRTRVTDR
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Known secondary structure (DSSP) TT



TT

T
TTS


TTT

TT




 .......
Sequence LLAQIAE
Predicted secondary structure

SS confidence






Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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