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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5vbbA_

Fold library idPDB HeaderMoleculeTitle
c5vbbA_1.94PDB header: rna binding proteinChain: A: PDB Molecule: rna pseudouridylate synthase domain-containing protein 1;


Added to library: Sat Apr 22 08:23:16 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEPGSVENLSIVYRSRDFLVVNKHWDVRIDLTLQKQLRYRFPGFRFCHQLDFSTSGALCVALNKAAAGSA
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Known secondary structure (DSSP)




TT


SS
TT
B


B



SS


TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YRCFKERRVTKAYLALLRGHIQESRVTISHAIGRNSTEGRAHTMCIEGSQGCENPKPSLTDLVVLEHGLY
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Known secondary structure (DSSP) TT

S


SS


SSSTTT

TTSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence AGDPVSKVLLKPLTGRTHQLRVHCSALGHPVVGDLTYGEVSGREDRPFRMMLHAFYLRIPTDTECVEVCT
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Known secondary structure (DSSP) TTSS

TTTT

BTT
TTTS
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TTSSSS


SS

 .........220.........230.........240.....
Sequence PDPFLPSLDACWSPHTLLQSLDQLVQALRATPDPD
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Known secondary structure (DSSP)



STTT
TT
S
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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